Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3644g00002 ATGACTTCAATGACACCACTAGTTCCTTCCCCTTCTTCAGTTTTCATCAATCTATTGTCAAGTCAAGGTTGTTTTGTGGTCTTTGAGGAGGAAGTTGGAAACATATGTGCTTCAACGATTGTAGCAATTGTAGCAATTGTTGTCCCAAATGTTATTTTGGTGGCGCTTTTGGTTCTAGGCTGTTGCTGTTGCTGGAGAAGAAGGCGAAACAAAAACCATGATGCAGATCTAGAAATGGGAGATAGCACTAGGAATTATTTTACTTGTCAAGAAGAGTCTTTGCATTTTGACTTGGCTACAATTGAAGCTGCAACAAATAGGTTCTCGAATGAGAAGAAGATAGGCCAAGGTGGATTTGGTGTGGTTTATAAGGGTACCCTTCCTAATGGACAAGAGATAGCTGCAAAGAGGCTATCCAGAAGCTCCTTGCAGGGTGACATAGAATTCAGGAACGAGGCTGCACTTGTTGCACTTCAACATAGAAATTTAGTTAGGCTTTTAGGATTTTGCTTGGAGGGAGGAGCAGAGAGGATACTTGTTTACGAATTCATCCCCAATTCAAGCCTTGACCGCTTTCTATGTGATCATGAGAACCAAGCAGAGCTTGATTGGGCAACACGTTACCAAATTATAGTTGGGATTGCTGGAGGAGTTAAATACCTCCATGAAGATTCTAGTCTTAGAATAATACATCGCGATCTCAAGGCTAGTAATGTCCTATTAGATGACGAAATGAATCCAAAGATTTCAGATTTTGGCATGGCAAAGATTTTCCATGGAGACCAAAGTCAAGTTGACTCTACAATGGCCTTTATAACTTACTAA 825 0.4061 MTSMTPLVPSPSSVFINLLSSQGCFVVFEEEVGNICASTIVAIVAIVVPNVILVALLVLGCCCCWRRRRNKNHDADLEMGDSTRNYFTCQEESLHFDLATIEAATNRFSNEKKIGQGGFGVVYKGTLPNGQEIAAKRLSRSSLQGDIEFRNEAALVALQHRNLVRLLGFCLEGGAERILVYEFIPNSSLDRFLCDHENQAELDWATRYQIIVGIAGGVKYLHEDSSLRIIHRDLKASNVLLDDEMNPKISDFGMAKIFHGDQSQVDSTMAFITY 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3644g00002 274 Pfam Protein tyrosine and serine/threonine kinase 110 267 IPR001245 GO:0004672|GO:0006468
Gabi3644g00002 274 ProSiteProfiles Protein kinase domain profile. 108 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3644g00002 274 SMART serkin_6 108 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3644g00002 274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Gabi3644g00002 274 Gene3D Phosphorylase Kinase; domain 1 70 183 - -
Gabi3644g00002 274 SUPERFAMILY Protein kinase-like (PK-like) 88 265 IPR011009 -
Gabi3644g00002 274 ProSitePatterns Protein kinases ATP-binding region signature. 114 136 IPR017441 GO:0005524
Gabi3644g00002 274 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 268 - -
Gabi3644g00002 274 FunFam Cysteine-rich receptor-like protein kinase 10 66 183 - -
Gabi3644g00002 274 Gene3D Transferase(Phosphotransferase) domain 1 184 273 - -
Gabi3644g00002 274 FunFam Os07g0541700 protein 184 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3644g00002 Gabi-Chr3644 5246 6523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3644g00002 41 268 Receptor kinase-like Gene Family AT4G23230 56.332 2.98e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi3644g00002 PK_Tyr_Ser-Thr 2.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3644g00002 - - ccaj:109806163 317.005