Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3642g00041 ATGGCTTCCCGTAACCAGAACCGTCCTCCTCGCAGCTCCTCTAACAAAAAGGTGGGTGCCGAAGAAGTGCTCTCAGACAGGGGTCGAAGGATTGGAGCTGGGAGTGCTAGAGCGCCGCTTTCTTCTGTGAACAATCAGTCAGATGATGCGGTGGCGAGTGACGTTGCGGAATGTAGTACTGTTGAGTTCACAAAAGAGGATGTAGAGACATTGCTGAATGAGAAGATGAAAAAGGGGAATCCTTATGATAATAAGAAAAAAATGGACCAGATGGTGGATCTTATTAAACGGCTTAAGCTCTGTGTTAGATGGTTTAAAAAAGTTGAAGAAGATAATGTTCAAGAAAAAGAAAAGCTTCAGTCTGAACTGGAGTCTGCTGAGAAGAAGTGCAGTGATACTGAGACTGAGATGAAAAATAAGATTGAGGTGTTGAATGAGACTATAGCTGATTTGAGGAAGACAATTTCTTCTTTAGAAGAGAGAATTGCGAATGAAGAATCAGATAAATTGGAAGCAATTAATTGTTATAGAAAAGAAAAGGAAGCCAGAAGCGCAGCTGAGAAAGTCCGGGATGAGAAATCAGCTGAGCTTGAGAAAGTTCGAGATGAGAAATCAGCTATTGAGCAGAAGGCCATTTCAAATGAGGGCGAGTACAAGCGATCACAAGAGTATAATATGAGCCTGCAGCAGTACAACAGTCGTCTTCAGTCAGATCTTGAAACAGCTAATGAGGCACATAAACGACTCGAAACAGAGAAAGCAACCATTGTTGAGAGTCTTGGTAATGTTAGAGTTCACAATAAGGCATTGCAGGATCAGATAGTATCTCTTAAAGTCTCACAGGATGAGGCTATAAAGCAGAAAGATATGTTAGCAAATGAACTAAAATGCCTCCGTCAAGAATTAAAACAAATTAGAGATGATCGTGATCACCAACAAGGGCAAGTAAATGCTTTAACTGGAGAAATAGAAAAGTACAGAGAATATACGGTGAAATCATGTGCTCAATTGGATACCTTGATGATTAAAACAAATGCTCTTGAGGAGACTTGTTCTTCTCAAAAGGAGCAAATATATATACTCCAGCAGCAGTTGACTTCTGAAAAGGAGAAATTAAAGATGGTTGATTTATCTGCTTCAGAAACAAGAAAAGTATTTGAAGAGCAGAAAAGAATTATACATGAACTACAGGATCGACTGGCAGATAAAGAATTTCAGGTTGTTGAAGGAGAAAAGCTAAGGAAAAAATTGCACAATACTATCCTGGAGCTAAAAGGAAATATTCGTGTGTTTTGCCGCGTGCGACCTTTACTACCGGAGGATGGTGTGGGAACTGACATGGTTGTTTCTTACCCTACATCAACAGAAGCGATTGGCCGGGGCATTGAATTGGTACAAAGTGGGCAGAAGTATTCTTTTACATTTGACAAGGTGTTTAATCATGAGGCTTCTCAGCATGATGTTTTCATCGAGATATCACAGCTGGTACAAAGTGCACTTGATGGCTACAAGGTGTGCATCTTTGCTTATGGGCAGACGGGTTCAGGAAAAACATATACAATGATGGGTAGGCCTGATGCCCTAGATCTGAAAGGGTTGATACCACGTTCTTTAGAACAAATATTCCAGACTAGTCAGACCCTGAAAGACCAGGGGTGGAAATACAAAATGCAGGCATCAATACTGGAAATATATAATGAGACCATTCGGGATTTGTTATCATCAAATCGGTCAAGTGGGATTGACCAGATGCGAACAGAAAATAGTGTTCCTAGCAAGCAGTACACTATTAAACATGATGCAAATGGAAACACACATGTTTCCGACCTCACAATTTTAGATGTTAGTAGCGTGAATGAGATTTCCTCCCTCCTGCAACAGGCTGCGCAAAGCCGGTCTGTGGGAAAAACACAGATGAATGAACAGTCATCAAGAAGCCACTTTGTCTTTACTTTGCGTATATGTGGGATAAATGAGAACACTGAACAACAAGTTCAAGGTGTCATAAACCTGATTGATCTGGCTGGAAGTGAAAGATTGTCAAGGAGTGGGGCAACTGGGGACAGGTTGAAGGAAACTCAGGCTATCAACAAAAGTCTCTCCTCTTTGAGTGATGTCATATTTGCTTTGGCAAAGAAAGAGGAGCATGTTCCTTTTAGGAATTCAAAGCTGACATACCTTCTCCAGCCATGTCTTGGTGGGGATTCGAAGACGTTGATGTTCGCTAACATCTCGCCTGATCAATCTTCAACGGGTGAGTCACTTTGCTCTCTCCGCTTTGCGGCCAGAGTCAATGCCTGTGAAATTGGAATTCCGCGGCGTCAGACTCAGACATCCACACGGTCCTTAGATTCTCGATTGAGCTGTGGTTAA 2373 0.4168 MASRNQNRPPRSSSNKKVGAEEVLSDRGRRIGAGSARAPLSSVNNQSDDAVASDVAECSTVEFTKEDVETLLNEKMKKGNPYDNKKKMDQMVDLIKRLKLCVRWFKKVEEDNVQEKEKLQSELESAEKKCSDTETEMKNKIEVLNETIADLRKTISSLEERIANEESDKLEAINCYRKEKEARSAAEKVRDEKSAELEKVRDEKSAIEQKAISNEGEYKRSQEYNMSLQQYNSRLQSDLETANEAHKRLETEKATIVESLGNVRVHNKALQDQIVSLKVSQDEAIKQKDMLANELKCLRQELKQIRDDRDHQQGQVNALTGEIEKYREYTVKSCAQLDTLMIKTNALEETCSSQKEQIYILQQQLTSEKEKLKMVDLSASETRKVFEEQKRIIHELQDRLADKEFQVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPEDGVGTDMVVSYPTSTEAIGRGIELVQSGQKYSFTFDKVFNHEASQHDVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDALDLKGLIPRSLEQIFQTSQTLKDQGWKYKMQASILEIYNETIRDLLSSNRSSGIDQMRTENSVPSKQYTIKHDANGNTHVSDLTILDVSSVNEISSLLQQAAQSRSVGKTQMNEQSSRSHFVFTLRICGINENTEQQVQGVINLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFANISPDQSSTGESLCSLRFAARVNACEIGIPRRQTQTSTRSLDSRLSCG 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3642g00041 790 Gene3D Kinesin motor domain 374 769 IPR036961 -
Gabi3642g00041 790 ProSiteProfiles Kinesin motor domain profile. 427 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3642g00041 790 Coils Coil 281 315 - -
Gabi3642g00041 790 Pfam Kinesin motor domain 433 765 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3642g00041 790 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 765 IPR027417 -
Gabi3642g00041 790 Coils Coil 386 406 - -
Gabi3642g00041 790 MobiDBLite consensus disorder prediction 1 51 - -
Gabi3642g00041 790 Coils Coil 183 210 - -
Gabi3642g00041 790 ProSitePatterns Kinesin motor domain signature. 667 678 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi3642g00041 790 PANTHER KINESIN-LIKE PROTEIN KLP-3 131 783 IPR027640 GO:0003777|GO:0007018
Gabi3642g00041 790 SMART kinesin_4 425 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3642g00041 790 PRINTS Kinesin heavy chain signature 717 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3642g00041 790 PRINTS Kinesin heavy chain signature 668 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3642g00041 790 PRINTS Kinesin heavy chain signature 502 523 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3642g00041 790 PRINTS Kinesin heavy chain signature 637 654 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3642g00041 790 Coils Coil 232 252 - -
Gabi3642g00041 790 CDD KISc_C_terminal 425 769 - -
Gabi3642g00041 790 FunFam Kinesin-like protein 373 769 - -
Gabi3642g00041 790 Coils Coil 106 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3642g00041 Gabi-Chr3642 446519 453520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3642g00041 336 764 Calmodulin-binding Proteins AT5G65930 36.219 7.80e-76 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3642g00041 K10405 - gmx:100818473 1200.65