Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3642g00038 ATGGTTTTGAGTGAGAACGTGGCCATTTTCAATTCCAACTTAGCTCAAACTGTTTTGAGGTTTCAGTATTTCCTCTATCCTTATTCTTATTATTCTTCCTCTTCTTTTAGATTTTATCTTCTTAACTGTAGGCTCAGTTTTTGTATTTGCACGGAAATGGCTTTTCAAATGGAAAGGGATATTCTCTTCCAAACCTTCTTGTGTTCCTTGCTCAGTATCTTGATGACAAGCCATGCTCTTGTCACTGATATCTACTGTTTAAAATCCATTAAGGATTTCTTGGAAGACCCGTTAAATTCCTTCTCCTCGAGCTGGAACTTGGACAACAACACCGAAGGTTTCATATGTAGATTTGATGGTGTTGAATGCTGGCATCCTGACGAGAATAGAGTACTAAATATCGACCTATCTAACATGGGGCTGAAGGGCCAGTTTCCAAGGGGCCTTCAGAATTGCTCTTCATTAGTAGGGCCAGTGCCTCAGTTATTGGAAGTTTCTGCTGATGTTTATGCTAATAATAGTGGGCTTTGTGGAGGGCCTTTGGAACCCTGCTCTTCCTTGGAAAATTCAACCAAATTCTTTGAATCATTCAAGGATGGCGTTGTTGTTGGTTATGTTTTTTCAGTGACTTGTGTTATTGTTGTTTGTATATCCTACTCCTACTGTGCACCTTGCGACCAACTGAAGAAGAAAAAAAAAAACCACCCAAACAAAGCTAAAGAACTGAGCAAATATATTTGTTCCATCACAAGGAGGAAGATACAAAGGGTAGCTAATCAGATGCACGAATTGCTACCTCTGCAGTTGGTAGAGAAAGGAAGCAAAGAGATCTCTGTCCTATTGGAAAGTTTGACTTCCACAATAAGGTTCGAAGAACTCCATGATGCAACTGACTGCTTTGCTATGGACAATGCCATTGGGGTGGGGAAGATGGGAATAATGTACAAGGGAAGGTTACCTAATGGTCAGTTCTTAGCTGTCAAGAGACTATTATTAGACTCTCAACTGTTCAATAGGCAGTTCGTTTCAGAAATAATGATTCAGGGTAAGTACAGACACAGAAATATAATGCCCCTGCTTGGCTTCTGCATGGAAAGAAACGAAAAGATTTTGGTATACCAGTACATGTCAAATGGAAGGCTTTCCAAATGGTTGCATCCTTTAGAAAGTGAAGTCATGAGATTGAAATGGCCTGAGAGGGTCAACATTGCACTTGGGATAGCAAGAGGATTATCATGGCTCCATCATAGCTGCAATTTGCAAATAGTGCATCTTAATATATGTTCCGAGTGTATATTACTAGATGATAATCTTGAACCCAAAATATCCAATTTTGGAGAGGCCAAATTTATGAATCCCAACACTGAAGATAATTTGGGCATGATGTTCAAAGTAAATGATGGGAAGAAGGATGTTTATGACTTTGGAAGTGTACTTTTTGAACTGATTACAGGAAAAACATATAATGAACTGTCCCGTTCATTCAGCACTACTAACCTTTGTGGTAATCCTTCAAATTTTTATAATGCAATTGATAAATCTCTGGCTGGGGAAGGGTTTGTAAATGAAGTGTGCACTCTCTTTAAAGTTGCTTGTGAGTGTGTTCGGCCTTTACCAGATCAAAGGCCAACAGTGCTTGAAGTTTACAATAATATGAGCAATATATGGAAGGGAAGACATGGATTAAATGATGAGTTTGACACACCATGTGGATCAGAAATTGTTTGTGTTACTAGTATAGATGAAATTGTTGAGTTATAA 1761 0.3867 MVLSENVAIFNSNLAQTVLRFQYFLYPYSYYSSSSFRFYLLNCRLSFCICTEMAFQMERDILFQTFLCSLLSILMTSHALVTDIYCLKSIKDFLEDPLNSFSSSWNLDNNTEGFICRFDGVECWHPDENRVLNIDLSNMGLKGQFPRGLQNCSSLVGPVPQLLEVSADVYANNSGLCGGPLEPCSSLENSTKFFESFKDGVVVGYVFSVTCVIVVCISYSYCAPCDQLKKKKKNHPNKAKELSKYICSITRRKIQRVANQMHELLPLQLVEKGSKEISVLLESLTSTIRFEELHDATDCFAMDNAIGVGKMGIMYKGRLPNGQFLAVKRLLLDSQLFNRQFVSEIMIQGKYRHRNIMPLLGFCMERNEKILVYQYMSNGRLSKWLHPLESEVMRLKWPERVNIALGIARGLSWLHHSCNLQIVHLNICSECILLDDNLEPKISNFGEAKFMNPNTEDNLGMMFKVNDGKKDVYDFGSVLFELITGKTYNELSRSFSTTNLCGNPSNFYNAIDKSLAGEGFVNEVCTLFKVACECVRPLPDQRPTVLEVYNNMSNIWKGRHGLNDEFDTPCGSEIVCVTSIDEIVEL 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3642g00038 586 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 190 555 - -
Gabi3642g00038 586 Gene3D Ribonuclease Inhibitor 83 174 IPR032675 -
Gabi3642g00038 586 SUPERFAMILY Protein kinase-like (PK-like) 279 550 IPR011009 -
Gabi3642g00038 586 Pfam Protein tyrosine and serine/threonine kinase 302 550 IPR001245 GO:0004672|GO:0006468
Gabi3642g00038 586 Gene3D Phosphorylase Kinase; domain 1 229 375 - -
Gabi3642g00038 586 ProSiteProfiles Protein kinase domain profile. 300 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3642g00038 586 Pfam Leucine rich repeat N-terminal domain 83 124 IPR013210 -
Gabi3642g00038 586 Gene3D Transferase(Phosphotransferase) domain 1 376 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3642g00038 Gabi-Chr3642 421100 423989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3642g00038 63 555 Receptor kinase-like Gene Family AT3G28450 27.741 1.12e-54 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gabi3642g00038 PK_Tyr_Ser-Thr 4.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3642g00038 - - psat:127106772 629.017