Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3642g00037 ATGGTTTTGAGTGAGAACGTGGCCATTTTCAATTCCAACTTAGCTCAAACTGTTTTGAGGTTTCAGTATTTCCTCTATCCTTATTCTTATTATTCTTCCTCTTCTTTTAGATTTTATCTTCTTAACTGTAGGCTCAGTTTTTGTATTTGCACGGAAATGGCTTTTCAAATGGAAAGGGATATTCTCTTCCAAACCTTCTTGTGTTCCTTGCTCAGTATCTTGATGACAAGCCATGCTCTTGTCACTGATATCTACTGTTTAAAATCCATTAAGGATTTCTTGGAAGACCCGTTAAATTCCTTCTCCTCGAGCTGGAACTTGGACAACAACACCGAAGGTTTCATATGTAGATTTGATGGTGTTGAATGCTGGCATCCTGACGAGAATAGAGTACTAAATATCGACCTATCTAACATGGGGCTGAAGGGCCAGTTTCCAAGGGGCCTTCAGAATTGCTCTTCATTAGTAGGTATAAACCTTTCACTCAACGAGCTCTCAGGACCCATCCCATCTGATATATCAAGATTACTCAAATTTTCTACCAGCATTGATCTCTCAAATAACAAATTCAGTGGCGAAATTCCAAAAGCTTTAGCTAACTGCACTTACCTGAATGCTCTTAAACTTGATAACAATATGTTAAGTGGTCAAATCCCACAAGAATTTGGACTGCTCCCCAGGATTAAAACAATCTCTTTTGCTAACAATCATTTGTCAGGGCCAGTGCCTCAGTTATTGGAAGTTTCTGCTGATGTTTATGCTAATAATAGTGGGCTTTGTGGAGGGCCTTTGGAACCCTGCTCTTCCTTGGAAAATTCAACCAAATTCTTTGAATCATTCAAGGATGGCGTTGTTGTTGGTTATGTTTTTTCAGTGACTTGTGTTATTGTTGTTTGTATATCCTACTCCTACTGTGCACCTTGCGACCAACTGAAGAAGAAAAAAAAAAACCACCCAAACAAAGCTAAAGAACTGAGCAAATATATTTGTTCCATCACAAGGAGGAAGATACAAAGGGTAGCTAATCAGATGCACGAATTGCTACCTCTGCAGTTGGTAGAGAAAGGAAGCAAAGAGATCTCTGTCCTATTGGAAAGTTTGACTTCCACAATAAGGTTCGAAGAACTCCATGATGCAACTGACTGCTTTGCTATGGACAATGCCATTGGGGTGGGGAAGATGGGAATAATGTACAAGGGAAGGTTACCTAATGGTCAGTTCTTAGCTGTCAAGAGACTATTATTAGACTCTCAACTGTTCAATAGGCAGTTCGTTTCAGAAATAATGATTCAGGGTAAGTACAGACACAGAAATATAATGCCCCTGCTTGGCTTCTGCATGGAAAGAAACGAAAAGATTTTGGTATACCAGTACATGTCAAATGGAAGGCTTTCCAAATGGTTGCATCCTTTAGAAAGTGAAGTCATGAGATTGAAATGGCCTGAGAGGGTCAACATTGCACTTGGGATAGCAAGAGGATTATCATGGCTCCATCATAGCTGCAATTTGCAAATAGTGCATCTTAATATATGTTCCGAGTGTATATTACTAGATGATAATCTTGAACCCAAAATATCCAATTTTGGAGAGGCCAAATTTATGAATCCCAACACTGAAGATAATTTGGGCATGATGTTCAAAGTAAATGATGGGAAGAAGGATGTTTATGACTTTGGAAGTGTACTTTTTGAACTGATTACAGGAAAAACATATAATGAACTGTCCCGTTCATTCAGCACTACTAACCTTTGTGGTAATCCTTCAAATTTTTATAATGCAATTGATAAATCTCTGGCTGGGGAAGGGTTTGTAAATGAAGTGTGCACTCTCTTTAAAGTTGCTTGTGAGTGTGTTCGGCCTTTACCAGATCAAAGGCCAACAGTGCTTGAAGTTTACAATAATATGAGCAATATATGGAAGGGAAGACATGGATTAAATGATGAGTTTGACACACCATGTGGATCAGAAATTGTTTGTGTTACTAGTATAGATGAAATTGTTGAGTTATAA 2010 0.3846 MVLSENVAIFNSNLAQTVLRFQYFLYPYSYYSSSSFRFYLLNCRLSFCICTEMAFQMERDILFQTFLCSLLSILMTSHALVTDIYCLKSIKDFLEDPLNSFSSSWNLDNNTEGFICRFDGVECWHPDENRVLNIDLSNMGLKGQFPRGLQNCSSLVGINLSLNELSGPIPSDISRLLKFSTSIDLSNNKFSGEIPKALANCTYLNALKLDNNMLSGQIPQEFGLLPRIKTISFANNHLSGPVPQLLEVSADVYANNSGLCGGPLEPCSSLENSTKFFESFKDGVVVGYVFSVTCVIVVCISYSYCAPCDQLKKKKKNHPNKAKELSKYICSITRRKIQRVANQMHELLPLQLVEKGSKEISVLLESLTSTIRFEELHDATDCFAMDNAIGVGKMGIMYKGRLPNGQFLAVKRLLLDSQLFNRQFVSEIMIQGKYRHRNIMPLLGFCMERNEKILVYQYMSNGRLSKWLHPLESEVMRLKWPERVNIALGIARGLSWLHHSCNLQIVHLNICSECILLDDNLEPKISNFGEAKFMNPNTEDNLGMMFKVNDGKKDVYDFGSVLFELITGKTYNELSRSFSTTNLCGNPSNFYNAIDKSLAGEGFVNEVCTLFKVACECVRPLPDQRPTVLEVYNNMSNIWKGRHGLNDEFDTPCGSEIVCVTSIDEIVEL 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3642g00037 669 SUPERFAMILY L domain-like 80 252 - -
Gabi3642g00037 669 Gene3D Phosphorylase Kinase; domain 1 313 458 - -
Gabi3642g00037 669 Gene3D Transferase(Phosphotransferase) domain 1 459 649 - -
Gabi3642g00037 669 ProSiteProfiles Protein kinase domain profile. 383 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3642g00037 669 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 71 255 - -
Gabi3642g00037 669 Gene3D Ribonuclease Inhibitor 82 269 IPR032675 -
Gabi3642g00037 669 FunFam Nuclear pore complex protein NUP107 81 244 - -
Gabi3642g00037 669 Pfam Protein tyrosine and serine/threonine kinase 385 633 IPR001245 GO:0004672|GO:0006468
Gabi3642g00037 669 SUPERFAMILY Protein kinase-like (PK-like) 362 633 IPR011009 -
Gabi3642g00037 669 Pfam Leucine rich repeat N-terminal domain 83 124 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3642g00037 Gabi-Chr3642 421100 423989 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3642g00037 73 649 Receptor kinase-like Gene Family AT1G69990 32.619 4.29e-101 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gabi3642g00037 PK_Tyr_Ser-Thr 6.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3642g00037 - - gmx:102664092 776.933