Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3642g00035 ATGGAATCCTCTAACCAGTTCCATGATTCATTCAAGCAAGGTCTTCTTGCTGGATATATTTTTGCTGCAACATTTGTCATAGTTTTTTATATGTCCTATTGTATACCTATACAACTTTTCAAGAAGAGGAAAAGAAACAAGGGTAAATGTAAATCCCCACATCAGGGGTTGAAACAGGACAACATCAAAGAGAAACGAAAGAAAGCCAGACAGATAGGTAAACCGCTGCCTGTGGAGTTGCTAGACAAAAGAATACAGATCAATGAAGTTGGAAGGTTCACTTGTAGAATGAGCTTCACAAAACTCTGCACTGCAACCAACTACTTTAGCATGGAAAATGCCATTGGAGCGGGAAGGATTGGGATAATGTACAAGGCAATGCTTCCCAACGGTTGGTTCCTAGCAATTAAGAGACTATATGATTCTCAGTTGCTTAACAAACAGTTTGAGTTAGAAATAATGATCCTGGGGAGATACAATCACAGAAACATAGTTCCCTTGCATGGTTTCTGCAAAGATGAAGAAGGAAATGAAAGGATTTTGGTGTATCAATACATGTCAAATGGAAGACTTTCCGATTGGTTGAGGGATGATGTCACGAGATTAGGATGGCCAGTGGTTATTAGAATAGCACTTGGGGTAGCAAGAGGTTTATGTTGCCTCCATCATAGCTTGCATATGGTTCATCATAGCATCAGTTCAGAGTGCATCTTATTAGAAAATAATTTTGAGCCCAGAATATCTAATTTTGGAGAGGCCATGTTTCTGAATCATGATATAGGCACGAACGGGGGTTGTAAGGAGGATGTCTATAACTTTGGAATTTTGCTTTTTGAGCTCATTAGGGGTAGGAAATTTGGAGATATAAGTGACTCTTTTAGCAATACCAATTGTCCTTTTGCCACTTTCACATATCCTAATCCTACAAATCTGTTGGAGAATCCTTGTGGCTTCTATGATGACATGGATAAATATTTAAACGAGATAGAATTTGAAGATGAGGTCTCTGCTCTTGTCAGAGTTGCATGTGACTGTGTTCATCCTTTTCCTGATCAAAGGCCTACGATGCTTAATGTATACAGTAAGATGAGTCACATATGGGAAAGGGATGGGATTTGTGAAGATTCTTTTACCTACTATCAGATGCACGAATTGCTACCTCTGCAGTTGGTAGAGAAAGGAAGTAAAGAGATCTCTGTCCTATTGGAAAGTTTGACTTCCACAATATTGTTCGAAGAACTCCATGATGCAACTGACTGCTTTGCTATGGACAATGCCATTGGGGTGGGGAAGATGGGAATAATGTACAAGGGAAAGTTACCTAATGGTCAGTTCTTAGCTGTCAAGAGACTATTATCAGACTCTCAGCTGTTCAATAGGCAGTTCCTTTCAGAAATAATGATTCAGGGTAAGTACAGACACAGAAATATAATGCCCCTGCTTGGCTTCTGCATGGAAAGAAATGAAAAGATTTTGGTATACCAGTACATGTCAAATGGAAGGCTTTCCAAATGGTTGCATCCTGTAGGAAGTGAAGTCATGATATTGAAATGGCTTGAGAGGGTCGACATTGCAATTGGGATAGCAAGAGGATTGTCATGGCTCCATCATAGCTGCAATTTGCAAATAGTGCATCTTAATATATGTTCCGAGTGTATATTACTAGATGAAAAATTTGAACCCAAAATATCCAATTTTGGAGAGGCCAAATTTATGAATCCCAACACTGATGATGATTTCGGCATGATATTCAAAGTAAATGATGGGAAGAAGGATGTTTATGACTTTGGAAGTGTACTTTTTGAACTGATTACAGGAAAAACATATAATGAACTGTCCTGTTCATTCAGCACTACTAACCTTTGTGGTAACCCTTCAAGTTTTTATAATGCAATTGATAAATCTCTGGCTGGGGAAGGGTTTGTAAATGAAGTGTGTACTCTCCTTAAAGTTGCTTGTGAGTGTGTTCGGCCTTTTCCAGATCAAAGGCCAACAATGCTTGAAGTTTACAATAATATGAGCAATATATGGAAGGGAAGACATGGATTCAATGATGAGTTTGACATGCCCAGAGGATCTGAAATTGTTTCTGTTACTAGTATAGACGAAATTGTCTGA 2118 0.3867 MESSNQFHDSFKQGLLAGYIFAATFVIVFYMSYCIPIQLFKKRKRNKGKCKSPHQGLKQDNIKEKRKKARQIGKPLPVELLDKRIQINEVGRFTCRMSFTKLCTATNYFSMENAIGAGRIGIMYKAMLPNGWFLAIKRLYDSQLLNKQFELEIMILGRYNHRNIVPLHGFCKDEEGNERILVYQYMSNGRLSDWLRDDVTRLGWPVVIRIALGVARGLCCLHHSLHMVHHSISSECILLENNFEPRISNFGEAMFLNHDIGTNGGCKEDVYNFGILLFELIRGRKFGDISDSFSNTNCPFATFTYPNPTNLLENPCGFYDDMDKYLNEIEFEDEVSALVRVACDCVHPFPDQRPTMLNVYSKMSHIWERDGICEDSFTYYQMHELLPLQLVEKGSKEISVLLESLTSTILFEELHDATDCFAMDNAIGVGKMGIMYKGKLPNGQFLAVKRLLSDSQLFNRQFLSEIMIQGKYRHRNIMPLLGFCMERNEKILVYQYMSNGRLSKWLHPVGSEVMILKWLERVDIAIGIARGLSWLHHSCNLQIVHLNICSECILLDEKFEPKISNFGEAKFMNPNTDDDFGMIFKVNDGKKDVYDFGSVLFELITGKTYNELSCSFSTTNLCGNPSSFYNAIDKSLAGEGFVNEVCTLLKVACECVRPFPDQRPTMLEVYNNMSNIWKGRHGFNDEFDMPRGSEIVSVTSIDEIV 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3642g00035 705 Pfam Protein tyrosine and serine/threonine kinase 111 362 IPR001245 GO:0004672|GO:0006468
Gabi3642g00035 705 Pfam Protein tyrosine and serine/threonine kinase 423 672 IPR001245 GO:0004672|GO:0006468
Gabi3642g00035 705 Gene3D Phosphorylase Kinase; domain 1 387 496 - -
Gabi3642g00035 705 Gene3D Phosphorylase Kinase; domain 1 78 185 - -
Gabi3642g00035 705 SUPERFAMILY Protein kinase-like (PK-like) 92 361 IPR011009 -
Gabi3642g00035 705 Gene3D Transferase(Phosphotransferase) domain 1 497 686 - -
Gabi3642g00035 705 Gene3D Transferase(Phosphotransferase) domain 1 263 376 - -
Gabi3642g00035 705 Gene3D Transferase(Phosphotransferase) domain 1 186 262 - -
Gabi3642g00035 705 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 406 677 - -
Gabi3642g00035 705 SUPERFAMILY Protein kinase-like (PK-like) 400 671 IPR011009 -
Gabi3642g00035 705 MobiDBLite consensus disorder prediction 53 68 - -
Gabi3642g00035 705 ProSiteProfiles Protein kinase domain profile. 109 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3642g00035 705 MobiDBLite consensus disorder prediction 47 68 - -
Gabi3642g00035 705 ProSiteProfiles Protein kinase domain profile. 421 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3642g00035 Gabi-Chr3642 404249 408065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3642g00035 362 687 Receptor kinase-like Gene Family AT1G69990 32.955 1.59e-49 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gabi3642g00035 PK_Tyr_Ser-Thr 3.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3642g00035 - - gmx:102663800 496.893