Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3641g00006 ATGGCGGAAGAGCACCGATGCCAAGCTCAAGAAGGCCACAGACTCTGCGCCAACAACTGCGGCTTCTTCGGTAGCCCAGCCACCATGAATCTCTGTTCCAAATGCTACGGAAACGTGCGTTTGAAGGAGCGAGAACAAGTCAAAACCAAATCCACCATCGAAACCGCTCTCTCCTCCGCCGCCTCCGCCGCCGCGGCTTCTTCTCTGCCGCTGGCCGTCGAATCCATCTCTCAACCGCCGGTGTTGACTTCGCCGGCGATCGCGCCTGCCGCATCGGGCTCCGCGTTCTTCGCGGCTGTACCTGTACCGGTTCAGCAGAACCGGTGCGGGACGTGTAGAAAGCGGGTCGGGTTGACCGGGTTCAGGTGCAGGTGTGGAACCACGTTTTGCGGGGCCCACAGGTATCCGGAGAAACACGGGTGTGGGTTCGATTTCAAGGCGGTGGGGCGAGAGGAGATAGCTCGAGCGAATCCCATGATCAAAGCTGACAAGCTGGAAAAGATTTAA 507 0.5897 MAEEHRCQAQEGHRLCANNCGFFGSPATMNLCSKCYGNVRLKEREQVKTKSTIETALSSAASAAAASSLPLAVESISQPPVLTSPAIAPAASGSAFFAAVPVPVQQNRCGTCRKRVGLTGFRCRCGTTFCGAHRYPEKHGCGFDFKAVGREEIARANPMIKADKLEKI 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3641g00006 168 Gene3D - 93 164 IPR035896 -
Gabi3641g00006 168 ProSiteProfiles Zinc finger AN1-type profile. 103 149 IPR000058 GO:0008270
Gabi3641g00006 168 SUPERFAMILY AN1-like Zinc finger 103 163 IPR035896 -
Gabi3641g00006 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 57 - -
Gabi3641g00006 168 FunFam Zinc finger AN1-type containing 6 94 164 - -
Gabi3641g00006 168 Pfam AN1-like Zinc finger 109 145 IPR000058 GO:0008270
Gabi3641g00006 168 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 168 - -
Gabi3641g00006 168 SMART AN1_Zf_4 109 146 IPR000058 GO:0008270
Gabi3641g00006 168 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Gabi3641g00006 168 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Gabi3641g00006 168 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Gabi3641g00006 168 Gene3D - 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3641g00006 Gabi-Chr3641 54625 55987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3641g00006 1 168 C2H2 Transcription Factor Family AT3G52800 52.874 3.13e-53 165