Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3637g00002 ATGATGGCGAGTTCAAGAGAAGGTTATCAAGCAAAGCAAGAGGGTGATACCATTAATTTTGAGAAATTCTCCAAGGCATCTTCAACTTCAAGACATTGGTCAGGGTTCAGAAATCCAAGAATTGTGCGAGTATCACGTTCTTTTGGAGGAAAAGATAGGCACAGCAAGGTTTGCACCATAAGAGGACTAAGGGATCGAAGGATTAGGCTCTCAGTACCCACAGCAATTCAGTTATATGATCTTCAAGACAAGCTTGGTCTTAGCCAACCAAGCAAGGTGATAGATTGGTTGATTGAGGCAACTAAATTTGACATTGATAAGCTTCCTCCACTTCAATTTCCTCAGGGTTTTTCTCAATTTCATCAACAAACCCTACTTCCTTTTCATGGATCAACTGTCTCTGATCTTTCTCTTGGACCCTTTTATGATGCTAATTCCTCATTTATGAGGGATGGGGGAACTCAAAATCTCATGGCAAAGTCAAGGTATTGGGATATAGATTCAATATCAAGACTAAAAGGCAAGGAAGTTGAAAGAGGGTACCATGTCTCTGAAAAAGAAAAGTGGATGAAAACAAATGAGCAAGAAAATCAAGATGGAGTTGGAGGTTACAATAGCCAGGTTTCAACTCAGAAGCTTTTCCCCATGGGTGGTGCTCACTCTTCTTTACCTGGTTTACTAAACAATACCATGGCATATAACTCCTACCATTCTGAACCTTCTAGTCTATCTTTATCCCCATTTGGAAGCCATAGTGAGTTGTTTCCTTCTCAGGTAGATCCCCATCCAAGTAGTGGCAGTGGTGTACAATTTCCATCTTCTTTGCCGGTACCATCAGGTTCTCAATTATTTTTTGGTACATCTTCTGCTGCACCATCACTCTTTACTCCATATGCTCCATTTATGGCCACCTCAGTGGAAAATGATCCAAGACAATTCAACCATATTCAGTTCTTAAACTCGAGTTCTCAAGCCTTGCCTCATCCTCTCATTTCATCTCTTCACTCATTCAATTCACATGTCAGACCCTATTCAGCACCATTTAGTTCCAAGCTTTTGGATTCAGATAATAACAATCTTAGCCAACCAGATAAGGGTAGTACTCCTTCTTGA 1113 0.4052 MMASSREGYQAKQEGDTINFEKFSKASSTSRHWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVIDWLIEATKFDIDKLPPLQFPQGFSQFHQQTLLPFHGSTVSDLSLGPFYDANSSFMRDGGTQNLMAKSRYWDIDSISRLKGKEVERGYHVSEKEKWMKTNEQENQDGVGGYNSQVSTQKLFPMGGAHSSLPGLLNNTMAYNSYHSEPSSLSLSPFGSHSELFPSQVDPHPSSGSGVQFPSSLPVPSGSQLFFGTSSAAPSLFTPYAPFMATSVENDPRQFNHIQFLNSSSQALPHPLISSLHSFNSHVRPYSAPFSSKLLDSDNNNLSQPDKGSTPS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3637g00002 370 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 300 IPR005333 GO:0003700
Gabi3637g00002 370 ProSiteProfiles TCP domain profile. 50 108 IPR017887 -
Gabi3637g00002 370 Pfam TCP family transcription factor 50 163 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3637g00002 Gabi-Chr3637 18801 20779 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3637g00002 7 305 TCP Transcription Factor Family AT5G60970 44.025 2.04e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi3637g00002 TCP 1.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3637g00002 - - gmx:100788984 511.531