Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3635g00064 ATGGAGTCGAGTAAGATTATAACAGCAAAAAACGGAAACGGGGACGTGTTGGCGGCGGAGGCGGACCCATTGAAGTGGAAGGCGGCGGCGGAGTCGTTGAAGGGGAGCCATTTTGAGGAAGTGAAGAGGATGGTGAGGGATTACCGGAAGGCGGTGGTGAGAGTGGGTGGGGAGACATTGACGGTGGGGGAGGTGGTGGCGGTGGCGGAGAGGCGGGTGACGGTGGAGCTGAACGAGGCGGCGAGGTTGGGAGTGAAGGCCAGCAGTGAGTGGGTGATGGATAGTGTGCACAAAGGAATTGATTGTTATGGGGTCACTACTGGTTTTGGTGCAACCTCCCACAGAAGAACCACACAGGGTGTTGCCCTTCAAACCGAACTCATAAGGTTTTTGAATGCTGGAATTTTTGGGAATGGGAAAGAAGCAAACCATACTTTGCCACACAGTGCAACAAGAGCTGCAATGCTGGTAAGAATCAATACCCTCCTTCAAGGCTACTCTGGCATCAGATATGAGATACTAGAAGCCATTGCAAAACTGCTCAATCACAACATCACACCAAGCTTGCCATTGCGTGGTTCAATTTCAGCCTCAGGTGACTTGGTTCCATTTTCATACATAGCTGGAATCCTGACAGGGAGGCCTAATTCAAAGGCTATTGGGCCCAATGGTGAGTCCCTAAGTGCTGCAGAAGCTTTCCATCTAGCTGGTATTGGTGAGGGCTGCTTTAAGTTGCAACCTAAGGAGGGTCTAGCACTTGTGAATGGAACTGGGGTTGGAGCTGGTTTGGCTTCTATAGTTGTGTTTGATGCCAACATCTTAACCATCTTATCTGAAGTCATGTCTGCTATTTTTGCTGAAGTCATGCAAGGGAAGCCAGAGTTCACAGACCATTTGACTCACAAATTGAAGCACCATCCTGGCCAGATTGAAGCTGCAGCTATTATGGAACATATCTTGCATGGAAGTGCTTATGTTAAAGAGGCTCAAAAGTTACATGATATAGACCCCTTCCAAAAGCCTAAGCAAGATAGATATGCTCTTCGGACTTCACCACAATGGTTAGGTCCTCAAATTGAAGTGATTCGGTTATCAACAAAGTCCATTGAAAGGGAGATCAACTCTGTGAATGATAACCCTTTGATTGATGTATCAAGGAACAAAGCTTTACATGGTGGCAATTTTCAGGGTACCCCAGTTGGGGTTTCAATGGACAACACAAGGTTAGCTTTGGCTGCCATTGGAAAACTCCTTTTTGCTCAAATGTCTGAGTTGGTTAATGATTTCTACAACAATGGTTTGCCTTCAAATCTCTCGGGGGGTCACTGTCCAAGCTTGGATTATGGATTTAAGGGTGGTGAGATAGCAATGGCTTCATATTGTTCTGAGCTTCAGTATCTAGCAAACCCTGTTACAAATCATGTGCAAAGTGCAGAACAACACAATCAAGACGTGAATTCATTGGGACTTATCTCTGCTAGGAAAACAGCTGAAGCTGTTGAAATATTAAAGCTCATGGTTTCAACCTACTTGATTGCTCTTTGTCAAGCAATAGATTTGAGGCATTTGGAGGAGAACCTAAAGAAAACAGTTAAGAATACGGTGAGCCAAGTGGCTAAAAAAGTCCTGAACCTAAATGGGGAGCTTCATCAGTCCAGGTCTTGTGAGAAAGATTTGCTCAAAGTGGTTGATAGTGAGTATGTTTTTGCCTACATTGATGACCCTTGTAATGCTACATACCCACTGATGCAAAAACTAAGGCAAGTGCTAGTGGAACATGCATTGCTGATTAATAATGGTTTGAAAAGTATAAATGCTTCCATCTTCATGAAGATTGGTGCTTTTGAGGAGGAACTGAAGAAAGTCTTGCCAAAAAATGTTGAAACTTCAAGGAATGCCTTTGAAAATGGGACTTCAACATGTCCTAACAAAATTAAGGGATGCAGGTCCTATCCATTGTATAAGTTTGTCAGAGAGGAATTGGGGACATATCTTCTAACAGGAGAAAAAGTTAAGTCCCCCGGAGAGGATTTTGATAAAGTATTTAATGCAATTACGCAGGGAAAGATAATAGACCCAATGTTAGAATGCCTCGAGGATTGGGATGGTACTCCTCTTCCTATATCCTCGTAG 2133 0.443 MESSKIITAKNGNGDVLAAEADPLKWKAAAESLKGSHFEEVKRMVRDYRKAVVRVGGETLTVGEVVAVAERRVTVELNEAARLGVKASSEWVMDSVHKGIDCYGVTTGFGATSHRRTTQGVALQTELIRFLNAGIFGNGKEANHTLPHSATRAAMLVRINTLLQGYSGIRYEILEAIAKLLNHNITPSLPLRGSISASGDLVPFSYIAGILTGRPNSKAIGPNGESLSAAEAFHLAGIGEGCFKLQPKEGLALVNGTGVGAGLASIVVFDANILTILSEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILHGSAYVKEAQKLHDIDPFQKPKQDRYALRTSPQWLGPQIEVIRLSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQMSELVNDFYNNGLPSNLSGGHCPSLDYGFKGGEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMVSTYLIALCQAIDLRHLEENLKKTVKNTVSQVAKKVLNLNGELHQSRSCEKDLLKVVDSEYVFAYIDDPCNATYPLMQKLRQVLVEHALLINNGLKSINASIFMKIGAFEEELKKVLPKNVETSRNAFENGTSTCPNKIKGCRSYPLYKFVREELGTYLLTGEKVKSPGEDFDKVFNAITQGKIIDPMLECLEDWDGTPLPISS 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3635g00064 710 Gene3D - 13 257 IPR024083 -
Gabi3635g00064 710 FunFam Phenylalanine ammonia-lyase 524 643 - -
Gabi3635g00064 710 PANTHER HISTIDINE AMMONIA-LYASE 18 708 IPR001106 -
Gabi3635g00064 710 FunFam Phenylalanine ammonia-lyase 258 569 - -
Gabi3635g00064 710 Gene3D - 524 643 IPR023144 -
Gabi3635g00064 710 CDD PAL-HAL 58 521 IPR001106 -
Gabi3635g00064 710 FunFam Phenylalanine ammonia-lyase 13 257 - -
Gabi3635g00064 710 Gene3D Fumarase/aspartase (Central domain) 259 703 - -
Gabi3635g00064 710 Pfam Aromatic amino acid lyase 60 535 IPR001106 -
Gabi3635g00064 710 SUPERFAMILY L-aspartase-like 22 708 IPR008948 GO:0003824
Gabi3635g00064 710 NCBIfam phenylalanine ammonia-lyase 22 699 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3635g00064 Gabi-Chr3635 461675 469911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3635g00064 16 708 Monolignol Biosynthesis Gene Families AT2G37040 77.044 0.0 1133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3635g00064 K10775 - csv:101218156 1103.97