Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3635g00062 ATGAAGCCTCAACTCAAAGTTGCTGTTGCTATTGCTATTAGCTTGCTCTGGATTCAGAACTCATTTTGTGGGGAATCATCTGATTCTGGCCTAAACAAGTGGAAGTGCAGATGTTCTTCTTTCCAAGGGAACCTGAGATACTCTCTTGCTAATTGTTCTAAGTCATGTGATTGCCATTCAGATGCTGAAGAGGGTGCATCCATATGGACATGCATATGTGATCCGAATGGGTTTCCTAAAGTGACAGCAGATGGCCGTAATCCTTATTGCTTTAATGCCTGCAACTGCAACTGGGGAATTGCCCGCATTCCACTAGGTTCAAAGAAACACATTTCGACCAAGATTGTTGTAGTTATTCTATTAATATGTGTTACATGCACAACTATTGCATTTCTTGCCTCAGTTGTATGCTATGTCTGGCGAAGGGAGAGAGGTCCTATTCAATCACCAATGATCTCATCAGATAAGGAAACAAGTTATAGTAGTCCCAGCAACTTACTTAGTCATAGGACTTCTTCTGTGCCTGAAACAAAAGTTACTATAAATTCTCCCATTAGTCATATTGCAGGATGCTTTCTGAAGGCCTCTTTCTTGTTTGGGAGCCCAAGAGAAATTTTTCATGGAAACATTATTCAATTTTCTTTTGCTGAACTGGAAAATGCCACTGAAAACTTTTCAGCTTCCAACCTAATTGGACTAGGTGGAAGTAGTTATGTATACCGTGGTCGGCTGAAAGATGGAAGTAATGTGGCAGTCAAGAGACTAAAACATCAAGTAGGGCCTGAAGCAGACTCTGAATTTTTTACAGAGATTGAACTATTGTCTAGACTTCATCATTGTCATCTGGTGCCGTTGATTGGATACTGCTCAGAATTAAAAGGAAAAAATGTTCTGAGGTTACTAGTGTTTGAGTACATGCCTAATGGCAATTTGAGGGACCGTTTGGATGGAGTTTTTGGAAAAAATATGGACTGGGCTACTCGTGTTACAATTGCATTAGGAGCTGCAAGGGGCTTGGAGTATCTTCATGAAGCAGCTGCTCCAAGAATTCTGCACAGAGATGTCAAATCGACAAACATTCTTCTGGATGAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCTAAAAACTTGATAGCTGATGACCTCCCCAGTTGTTCAGATACTCCAGAAATATTGCAAGGGACATTTGGTTATTTTGCACCTGAGTATGCAATTATAGGGAGAGCTTCTCTTGAGTCAGATGTCTTCAGTTTTGGGGTGGTTCTTCTTGAGCTTCTAAGTGGTCGGCAACCAATCCATAAATCTGCAGGCAAAGAAGAATGCCTTGTTATATGGGCCACTCCTCGCTTACAGGATAGTAAGCGATTAATGAAGGAGTTGGTTGATCCAAAATTGAAAGGAAACTTCCCTGAAGAAGAGGTGCAGATAATGGCGTATTTAGCAAAGGAGTGCTTGCTGTTGGATCCTGACACTCGACCAACTATGAGGGAAGTTGTTCAAATTCTTTCAAGTATTTCCCCAGGCAAATATAAAAGGAGAAGAAACATTCCAGTTGGCATTTTTCAGGAACCAGAGAAGCAAGGTCAAGCTCCATCAAGTAGATTTTCAGCTCGTAATTTACCGCTACAAGGTGTTGATCAGAAGCTTCTTGTTGGAAACGAGAATAAAGATGTAGATACAGTTTCAATTTCAACTGAGTATATGAAGAGTTTGATCCTCTTTTCTACAAAAGGTGAGAGCTGGCATGCAACAGAAGAGGAAATGGTAGATTTAACCGAGCCTCAGTTTGAATCATTTTGCATGACAAACGTCAATTTCCCATGA 1830 0.406 MKPQLKVAVAIAISLLWIQNSFCGESSDSGLNKWKCRCSSFQGNLRYSLANCSKSCDCHSDAEEGASIWTCICDPNGFPKVTADGRNPYCFNACNCNWGIARIPLGSKKHISTKIVVVILLICVTCTTIAFLASVVCYVWRRERGPIQSPMISSDKETSYSSPSNLLSHRTSSVPETKVTINSPISHIAGCFLKASFLFGSPREIFHGNIIQFSFAELENATENFSASNLIGLGGSSYVYRGRLKDGSNVAVKRLKHQVGPEADSEFFTEIELLSRLHHCHLVPLIGYCSELKGKNVLRLLVFEYMPNGNLRDRLDGVFGKNMDWATRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNLIADDLPSCSDTPEILQGTFGYFAPEYAIIGRASLESDVFSFGVVLLELLSGRQPIHKSAGKEECLVIWATPRLQDSKRLMKELVDPKLKGNFPEEEVQIMAYLAKECLLLDPDTRPTMREVVQILSSISPGKYKRRRNIPVGIFQEPEKQGQAPSSRFSARNLPLQGVDQKLLVGNENKDVDTVSISTEYMKSLILFSTKGESWHATEEEMVDLTEPQFESFCMTNVNFP 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3635g00062 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Gabi3635g00062 609 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Gabi3635g00062 609 Gene3D Phosphorylase Kinase; domain 1 201 305 - -
Gabi3635g00062 609 Pfam Protein kinase domain 227 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3635g00062 609 FunFam receptor-like serine/threonine-protein kinase NCRK 306 516 - -
Gabi3635g00062 609 ProSiteProfiles Protein kinase domain profile. 225 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3635g00062 609 PANTHER OS01G0750732 PROTEIN 70 511 - -
Gabi3635g00062 609 CDD STKc_IRAK 231 507 - -
Gabi3635g00062 609 SMART serkin_6 225 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3635g00062 609 FunFam receptor-like serine/threonine-protein kinase NCRK 199 305 - -
Gabi3635g00062 609 SUPERFAMILY Protein kinase-like (PK-like) 205 504 IPR011009 -
Gabi3635g00062 609 Gene3D Transferase(Phosphotransferase) domain 1 306 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3635g00062 Gabi-Chr3635 428123 433017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3635g00062 1 606 Receptor kinase-like Gene Family AT2G28250 51.555 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Gabi3635g00062 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3635g00062 - - gmx:100499641 994.571