Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3635g00061 ATGGGTTTTGGTCATTCAAGATCTGAAAGGTTTGAGGATGATCCTGAGCTAGCAAAAATCCCCGCAACTAATGGTGGAAATGGGGTAAAGCTTAAATACAACATTGATGGAACACAAATAGCTGAGCCTAGTTCCAAAATGGTTGAGAAGAAGATGACAGGGAAGACGGGAAAGTTCTTGAAAGCTAGAGTATTGTCAAGAGTATTCTCAGAGGACTATGACAAAGTAAAACGAAGAACATTAGATCCCCGGGGACAAATCATTCACCGGTGGAACAAGATTTTCTTGGTAGCATGTTTAGTATCTTTGTTTGTGGACCCTCTCTTCTTTTATTTGCCAGTAGTTAGAGATGAAGCCTGCATTGATATTGGAATAACTCTTGAAGTTATTCTCACAATTGTTAGATCAGGGGGGGATGTCCTTTACATGATTCAGATTTTGATGAAGTTTCGTACAGCTTATGTTGCTCCTTCTTCCCGGGTATTTGGGAGAGGAGAACTTGTTCTAGGATATTCTAAGATTGCAATTAGATACCTCCGCAAAGGTTTCTGGTTAGACTTTTTTGCTGCCTTGCCCCTTCCTCAGGTGTTAATTTGGATTGTTATACCAACTCTTAGGGGTTCAACCATGGCAAACACAAAAAATGTCCTTCGCTTTTTCATCATTTTCCAATATCTTCCGAGGCTATATCTGATTTTTCCACTTTCTTCACAAATTGTAAAAGCTACAGGGGTTGTGACACAAACAGCATGGGCAGGGGCTGCTTACAACCTGATGCTTTACATGTTGGCTAGCCATATTTTAGGAGCTTGCTGGTACCTTCTAGCAATCGAACGTCAAGAAGCATGCTGGAGAAGTGTCTGCGATATGGATAAGTCATCTTGTCAGTATGGATTCTTTGACTGTCACAGGGTTAATGAAGCTCTTAGGGGCTCCTGGTTTATAGCAAGTAATGTCACAAATTTATGCTCACCAAATGCTGACTTTTATCAGTTTGGTATATACGCTGATGCTGTGACTTTCCAAGTTACATCCTCGCCATTCTTTAATAAGTACTTCTTTTGCCTGTGGTGGGGCCTAAGGAATCTGAGTTCTTTGGGACAAGGCCTTCTTACTAGCACTTTTGTTGGAGAAGTCATGGTCGCCATTGTGGTTGCAACCCTTGGATTGGTTCTTTTTGGGTTGCTCATTGGTAATATGCAGACATACCTCCAATCAACAACAGCTCGCTTAGAAGAGTGGAGGGTGAAAAGAACTGATACAGAACAATGGATGCATCACAGGCAACTACCTCCAGAACTAAGACAATCTGTGCGTAAATATGATCAATATAAATGGCTGGCTACACGTGGGGTAGATGAAGAAGCTCTTCTCAAAGGACTTCCAGTGGATCTTCGGAGAGACATCAAGCGCCACCTTTGTCTTGAACTAGTTCGAGGAGTGCCATTGTTTGATCAAATGGATGAGAGGATGCTAGTCGCAATATGTGAAAGGCTAAAGCCTGCGTTGTGCACTGAGGGCACTTATCTTGTTCGTGAGGGTGATCCTGTGAATGAGATGCTTTTCATAATTCGAGGCCATCTTGATTCTTACACCACCAATGGAGGCCGAGTTGGATTCTTCAACTCATGCCATGTTGGTGCAGGTGATTTCTGTGGTGAGGAACTATTAACATGGGCATTGGACCCACGAACAAGTGTAATACTCCCTTCTTCAACTCGAACAGTTAAAGCCATCTCAGAAGTAGAGGCCTTTGCACTCATAGCCGAAGACTTAAAGTTTGTTGCATCTCAATTTAGAAGACTACACACTAAACAACTCAGACATAGATTCAGGTTTTACTCACACCAATGGAGAACATGGGCAGCTTGTTTCATTCAAGCTGCATGGAGAAGGCATAAGAAAAGGAAGGAAGTTGCTGAACTGAAGGCCGAGGAGAATCTCGCAGTTGCTGAATCTGAAACATCAACATCAACATCTTATGCAACAAGGGTCGCGAGGAGCATTAGGAAAGGTGTCAATAAGCATTCTGGAGTTGTCAGCAGCTCTTTGCAAAAGCCAGCAGAACCAGACTTTTCTGTAGATGAAAAATGA 2094 0.425 MGFGHSRSERFEDDPELAKIPATNGGNGVKLKYNIDGTQIAEPSSKMVEKKMTGKTGKFLKARVLSRVFSEDYDKVKRRTLDPRGQIIHRWNKIFLVACLVSLFVDPLFFYLPVVRDEACIDIGITLEVILTIVRSGGDVLYMIQILMKFRTAYVAPSSRVFGRGELVLGYSKIAIRYLRKGFWLDFFAALPLPQVLIWIVIPTLRGSTMANTKNVLRFFIIFQYLPRLYLIFPLSSQIVKATGVVTQTAWAGAAYNLMLYMLASHILGACWYLLAIERQEACWRSVCDMDKSSCQYGFFDCHRVNEALRGSWFIASNVTNLCSPNADFYQFGIYADAVTFQVTSSPFFNKYFFCLWWGLRNLSSLGQGLLTSTFVGEVMVAIVVATLGLVLFGLLIGNMQTYLQSTTARLEEWRVKRTDTEQWMHHRQLPPELRQSVRKYDQYKWLATRGVDEEALLKGLPVDLRRDIKRHLCLELVRGVPLFDQMDERMLVAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRVGFFNSCHVGAGDFCGEELLTWALDPRTSVILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHTKQLRHRFRFYSHQWRTWAACFIQAAWRRHKKRKEVAELKAEENLAVAESETSTSTSYATRVARSIRKGVNKHSGVVSSSLQKPAEPDFSVDEK 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3635g00061 697 ProSiteProfiles IQ motif profile. 619 647 IPR000048 GO:0005515
Gabi3635g00061 697 MobiDBLite consensus disorder prediction 1 17 - -
Gabi3635g00061 697 SUPERFAMILY Voltage-gated potassium channels 82 405 - -
Gabi3635g00061 697 PRINTS EAG/ELK/ERG potassium channel family signature 146 155 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi3635g00061 697 PRINTS EAG/ELK/ERG potassium channel family signature 446 453 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi3635g00061 697 PRINTS EAG/ELK/ERG potassium channel family signature 396 405 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi3635g00061 697 PRINTS EAG/ELK/ERG potassium channel family signature 263 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi3635g00061 697 PRINTS EAG/ELK/ERG potassium channel family signature 352 369 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi3635g00061 697 CDD CAP_ED 483 614 IPR000595 -
Gabi3635g00061 697 Gene3D Jelly Rolls 481 601 IPR014710 -
Gabi3635g00061 697 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 67 692 - -
Gabi3635g00061 697 Pfam Ion transport protein 91 410 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gabi3635g00061 697 MobiDBLite consensus disorder prediction 674 697 - -
Gabi3635g00061 697 SMART cnmp_10 483 614 IPR000595 -
Gabi3635g00061 697 FunFam Cyclic nucleotide-gated ion channel 1 481 599 - -
Gabi3635g00061 697 Gene3D - 93 407 - -
Gabi3635g00061 697 Gene3D Helix hairpin bin 409 474 - -
Gabi3635g00061 697 MobiDBLite consensus disorder prediction 1 23 - -
Gabi3635g00061 697 FunFam Cyclic nucleotide-gated ion channel 1 410 474 - -
Gabi3635g00061 697 SUPERFAMILY cAMP-binding domain-like 412 608 IPR018490 -
Gabi3635g00061 697 ProSiteProfiles cAMP/cGMP binding motif profile. 483 580 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3635g00061 Gabi-Chr3635 412273 417554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3635g00061 57 695 Ion Channels AT2G28260 74.844 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3635g00061 K05391 - gmx:100786868 1193.33