Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3635g00038 ATGGCTATGGCTGTGGCTCAACACAGAGAAAGCAGCATTGACAAACACCTTGATGCTTCTGGGAAATATGTTCGATACACGGCGGAGCAAGTTGAAGCTCTTGAACGGGTTTACACAGAGTGCCCCAAGCCAAGTTCCTTGAGAAGACAACAACTAATCAGAGAGTGTCCCATTCTGGCAAACATTGAACCCAAGCAAATCAAAGTTTGGTTCCAGAATCGCAGGTGTAGAGAGAAGCAGAGAAAAGAGGCTTCACGGCTTCAGACTGTGAACCGGAAACTGACAGCAATGAACAAGTTGTTGATGGAGGAAAATGATCGGTTGCAGAAACAGGTGTCACATTTGGTATGCGAGAATGGTTATATGCGGCAGCAATTGCATACTGTAACAGCAGCAGCAACTACTGATGCAAGTTGTGATTCGGTGGTTACTACTCCTCAGCATAATATGAGAGATGCTAATAACCCTGCTGGATTCCTATCAATTGCAGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCCATTTCGCATAGTTGCAGTGGAGTGGCAGCTCGAGCCTGTGGTCTTGTTAGTTTAGAACCTACAAAGATTGTGGAGATCCTTAAAGATCGTCCATCATGGTTTCGGGATTGTCGGAGTCTAGAAGTTTTCACAATGTTCCCAGCTGGAAATGGAGGGACAGTTGAACTTGTTTACACGCAGACATACGCTCCAATGACACTGGCTCCTGCCCGGGATTTCTGGACTCTGAGGTACACTACAAGTTTAGAAAATGGCAGTCTTGTGGTTTGTGAGAGGTCACTGTCTGGTTCTGGTGCTGGGCCTAATGCAGCTGCTGCTGCTCAGTTTGTGAGAGCCGAAATGCTCCCTAGTGGCTACTTGATTCGACCATGTGAAGGTGGAGGATCAATCATCCACATTGTAGACCACCTAAACCTGGAGGCATGGAGTGTGCCAGAAGTGCTGCGACCACTTTATGAATCATCAAAAGTGGTAGCTCAGAAAATGACAATTGCGGCACTTCGCTATATCAGGCAAATAGCTCAGGAAACAAGTGGTGAAGTGGTATATGGCTTAGGTAGGCAACCTGCTGTTCTGAGAACCTTTAGCCAAAGGTTGAGCAGAGGCTTCAATGATGCTGTCAATGGATTCAATGATGATGGCTGGTCTGTACTGAACTGTGATGGTGCCGAGGATGTTATTATCGCTGTTAATTCAACCAAGAATTTGAGTGGCACTTCTAATTCAGCAAGTTCCCTTACATTCCCTGGAGGAATTCTCTGTGCAAAAGCTTCTATGTTACTCCAAAATATCCCTCCTGCAGTTTTAGTTCGTTTTCTGAGGGAGCATCGCTCTGAGTGGGCTGATTTTAATGTTGATGCCTATTCTGCTGCATCACTTAAAGCTGGCTCCTATGCCTATCCAGGAATGAGGCCTATGAGATTCACTGGCAATCAAATAATCATGCCTCTTGGACATACAATTGAACATGAAGAGATGCTAGAAGTTATCCGGCTTGAAGGTCACTCTCTTGCTCAAGAAGATGCTTTTGTTTCTAGGGACATTCATCTATTACAGTTAAGTAGTGGAATCGATGAAAATGCTGTGGGAGCTTGTTCTGAGCTCATATTTGCTCCAATTGACGAAATGTTTCCTGATGATGCTCCATTGGTGCCTTCCGGTTTCCGCATTATCCCATTGGATTTAAAACCAGGTGATAAAAAGGATGCAATGACAACAAATCGAACCTTGGATTTGACATCTGGTCTTGAAGTAGGCCCAGCAACAAGTCATGCTGGAGGAGATGCTTCATCAAGTTATAACAATCGATCAGTGTTGACAATTGCATTCCAGTTTCCTTTTGACAGCAGTATGCAGGATAATGTTGCGGCCATGGCACGTCAGTATGTACGTAGTGTGATTTCCTCTGTGCAGACGGTTGCCATGGCTATATCTCCATCTGGTATAAACCTGGCTGTAGGAGCAAAACTATCTCCTGGCTCTCCAGAAGCTCTTACACTAGCTCATTGGATCTGCCAGAGTTACAGTTACCATTTGGGGACGGAACTACTGAGGTCTGATTCTCTTGTCGGTGATTTGGTGCTGAAACATTTGTGGCATCATCAGGATGCCATTTTGTGCTGTTCTTTGAAGTCAATGCCCGTATTCATCTTTGCAAACCAGGCTGGCCTTGACATGTTGGAAACAACTCTAGTGGCTTTACAAGACATCACGTTGGATAAAATATTTGATGAGTCTGGACGCAAGGCATTGTCTGCAGATTTTGCCAAGTTAATGCAGCAGGGGTTTGCTTATCTGCCAGCTGGGATCTGCATGTCCACAATGGGGCGGCATGTTTCATATGAGCAAGCCATTGCATGGAAAGTGCTTGCTGAAGAAGATAACAATGTTCATTGCTTAGCTTTCTCTTTCATAAATTGGTCGTTTGTATGA 2526 0.4525 MAMAVAQHRESSIDKHLDASGKYVRYTAEQVEALERVYTECPKPSSLRRQQLIRECPILANIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVCENGYMRQQLHTVTAAATTDASCDSVVTTPQHNMRDANNPAGFLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISHSCSGVAARACGLVSLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTVELVYTQTYAPMTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGAGPNAAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSVLNCDGAEDVIIAVNSTKNLSGTSNSASSLTFPGGILCAKASMLLQNIPPAVLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPMRFTGNQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFVSRDIHLLQLSSGIDENAVGACSELIFAPIDEMFPDDAPLVPSGFRIIPLDLKPGDKKDAMTTNRTLDLTSGLEVGPATSHAGGDASSSYNNRSVLTIAFQFPFDSSMQDNVAAMARQYVRSVISSVQTVAMAISPSGINLAVGAKLSPGSPEALTLAHWICQSYSYHLGTELLRSDSLVGDLVLKHLWHHQDAILCCSLKSMPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALSADFAKLMQQGFAYLPAGICMSTMGRHVSYEQAIAWKVLAEEDNNVHCLAFSFINWSFV 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3635g00038 841 ProSiteProfiles START domain profile. 152 380 IPR002913 GO:0008289
Gabi3635g00038 841 FunFam Homeobox-leucine zipper protein REVOLUTA 22 77 - -
Gabi3635g00038 841 Pfam START domain 162 369 IPR002913 GO:0008289
Gabi3635g00038 841 SUPERFAMILY Bet v1-like 161 373 - -
Gabi3635g00038 841 ProSiteProfiles 'Homeobox' domain profile. 17 81 IPR001356 GO:0003677
Gabi3635g00038 841 SMART HOX_1 19 85 IPR001356 GO:0003677
Gabi3635g00038 841 Gene3D - 15 88 - -
Gabi3635g00038 841 Coils Coil 91 118 - -
Gabi3635g00038 841 CDD homeodomain 22 82 IPR001356 GO:0003677
Gabi3635g00038 841 SMART START_1 161 371 IPR002913 GO:0008289
Gabi3635g00038 841 Pfam MEKHLA domain 697 840 IPR013978 -
Gabi3635g00038 841 SUPERFAMILY Homeodomain-like 18 84 IPR009057 -
Gabi3635g00038 841 CDD bZIP 74 113 - -
Gabi3635g00038 841 Pfam Homeodomain 22 80 IPR001356 GO:0003677
Gabi3635g00038 841 Gene3D - 196 378 IPR023393 -
Gabi3635g00038 841 CDD START_ArGLABRA2_like 156 372 - -
Gabi3635g00038 841 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 19 841 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3635g00038 Gabi-Chr3635 247218 255566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3635g00038 1 841 Homeobox Transcription Factor Family AT5G60690 82.686 0.0 1458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gabi3635g00038 START 2.1e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3635g00038 K09338 - gmx:100804870 1531.54