Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3635g00024 ATGGCGAAAGACGACGTTGAGGTTGCAGAGCAAGTTGAATACTCAGCAAAGGACTATCATGACCCTCCTCCAGCAGCGTTGTTTGACCCTGAGGAGCTGACAAAGTGGTCTTTGTATAGAGCTGTAATAGCAGAGTTCATAGCAACCCTTCTTTTCCTTTACATCACCGTGTTAACCATTATTGGTTACAATAGACAGACAGATCCCAATATTCCAGATTCCCAATGTGAGGGGGTTGGTGTTTTGGGCATAGCTTGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACCGCCGGTATCTCTGGAGGACACATAAACCCTGCAGTGACTTTTGGGTTGTTCCTAGGACGCAAGGTGTCGCTGGTAAGGGCGTTACTGTACATGATAGCACAGTGTTTAGGTGCAATCTGTGGTGCTGGACTTGCTAAGGGTTTTCAAAAAGGATACTATGTGAGGTATGGTGGTGGGGTTAATCTTGTGCAAGGAGGGTATACCAAAGGTACAGCTTTGGGTGCTGAGATAATTGGTACCTTTGTTCTTGTCTACACTGTCTTTTCTGCCACTGATCCTAAGAGGAGCGCTAGAGACTCTCATGTTCCTGTATTGGCACCACTTCCTATTGGATTTGCTGTTTTCATGGTTCACTTGGCTACAATCCCTGTTACTGGTACTGGCATCAACCCTGCAAGGAGTTTTGGACCAGCTGTGATCTTCAACCAGGACAAGGCTTGGGATGACCAAGTAATGGATTTACTGGGTTGGACCATTTGTTGGAGCTGCAGTAGCTGCTTTCTACCACCAATATATTCTTAG 819 0.4628 MAKDDVEVAEQVEYSAKDYHDPPPAALFDPEELTKWSLYRAVIAEFIATLLFLYITVLTIIGYNRQTDPNIPDSQCEGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCLGAICGAGLAKGFQKGYYVRYGGGVNLVQGGYTKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNQDKAWDDQVMDLLGWTICWSCSSCFLPPIYS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3635g00024 272 NCBIfam MIP family channel protein 44 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3635g00024 272 PRINTS Major intrinsic protein family signature 210 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3635g00024 272 PRINTS Major intrinsic protein family signature 88 112 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3635g00024 272 PRINTS Major intrinsic protein family signature 125 144 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3635g00024 272 PRINTS Major intrinsic protein family signature 174 192 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3635g00024 272 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3635g00024 272 CDD MIP 40 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3635g00024 272 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 10 255 IPR034294 -
Gabi3635g00024 272 FunFam Probable aquaporin PIP1-2 25 270 - -
Gabi3635g00024 272 ProSitePatterns MIP family signature. 106 114 IPR022357 -
Gabi3635g00024 272 Gene3D Glycerol uptake facilitator protein. 25 267 IPR023271 -
Gabi3635g00024 272 Pfam Major intrinsic protein 32 255 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3635g00024 272 SUPERFAMILY Aquaporin-like 31 240 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3635g00024 Gabi-Chr3635 184031 185757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3635g00024 1 249 Major Intrinsic Protein MIP AT5G60660 76.305 4.53e-138 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3635g00024 K09872 - gmx:732604 451.44