Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3635g00023 ATGAATCCCATTGGTTTGTCCCTCCTCTTCCTCCTTTCTCTGGCACTTGTCTCGATTGTTATAGGCCAAGAAAGAGCACCCCATGGGCTTGTATACGAGAATCCTGAAGCTTTTCCACCATCAGCATATAACTTTTTTCATCCCAATGTAAGAAAGCCCGAAACCACCAAAGACCCATGTACTATATCCAAATGTTCACCCTTTCCTTTAGCAGCTCAAGTGGAAGCTACTCAAGTTCATCACAACAAAGCCTCCACATCCGAGAGAAGTAGAAAAAAATTGGGAGCTGGTGGTGTAGCGGGCATTGTCTTTGGTGTTGCTTTTGTTGTGCTTTTAGCTATGAGTGTGTACCACACAAGGGTAATTGAGGATGATAATTCTGAAAAGCATAGGGACATAAAGATTCCTTGGGAATATTTTGGAATTTGGAATTGCATTTCTCAACCGGGGGAAATTTGTGTATTTAACAAAGTTCAAAAGAAACCAGCATTTTCACCTGTCCATTTCAATGAAGACAACCTGTTTAAAGCGTTTTTTACACATTTCTTAAATGCAGCTGAGGCTTTGTTCACTTTCAAGGATTCACTTGACAGTCCACAGCAATTCAGATGCAGCATTGTGAAATATCCATGTCAAAAGCAATGGCCATGTCTTGACTGCTATAAACTAAAAGATCCAGGTGTAATAACAGCAAAGATAGATGGGAATAATGACATTCCAACACTTACACCTCTTCAAGAAGCTCAAGTTGACAAACAAGGAGGAAGAAGGGATGCCCTCATAGTTGGTGTTGTTGTTTCTGCCTTAGTTGTCATTGTCATTGTGGTGATTGTTTATATCTGCTTGATGAGGGTCAAAAGATTCATAAGGCAAACATCTGAGAGTGCTTCTTCTATGCCATCTCCAACTGTTGAAATGGGAAGTGGCAACAACTCGCATTATGTTAATGCTTTCTCTCCACATTATTGCCAGAACACAAGGCAGTTAACAATTTTGGAACTAGAACAAGCTACAGGAAATTTTAGTGAGAGCAATATTATAGGTGAAGGTAGATTTGGTTTTGTTTATAAGGGTTTGCTTCAAGATGGGTCTATTGTGGCTATAAAAAGGCGCCTATTTGCTCTGACACGGGATTTCATACCTGAGGTGAAGCAGATAGCTGACATCCACCACATCCATCTTGTCAAGCTTATAGGCTATTATGAAGATAGCTATCAACAATTACTTGTGCATGAATATCTCCCTAATGGCAATGTAGGGAATCACCTATATGACAGTGAAGGTTTACCAATTGGAAGGTTAGACTTGTGGAGAAGGTTATCCATTGCTTTAGGCACGTCCAAAGGACTAGAACATCTTCACAGTTTGGTCCCTCCTTTGGTTCACACAAATTTTAGAACTAGCAATGTTCTGTTAGATGAAAATTATAATGCCAAGGTTTCTGATTATGGATTGTGCAAATTGCAAACAAAAGTTGATCAGGCTGGTTCATCTTCAAATGTAGATTGCTTTCTTGACCCAGAGTTCAGCTTATCACAAAACTATTCGGAGCAGAGTGATGTATACAGCTTCGGGGTCTTCTTACTAGAGTTGATTAGTGGCTGTGAAGCACATAACAGAAACATGTCAAACCCCGAGGAAAATCTAGTATTCCAGGCAAAAAATAGCAATGGCTTGGACAAGTTTGTTGACATAACGCTAGGAGACCATGAAAGGCATGCTGCTAGACGAATGATGAAGTTGGCGTTGCTATGTGTTGATGTGACTTTTAGAAGACCATCAATGGCGCAAATTGTGCAAGAACTGGAGCGGATTCAAAGAGAAATTGCTCCTTTGTGTTGTCAAGTTAACGAGGAGATTGGTGTGGTCACTCTTGGAAGTGAACTCTTCCAATAA 1896 0.403 MNPIGLSLLFLLSLALVSIVIGQERAPHGLVYENPEAFPPSAYNFFHPNVRKPETTKDPCTISKCSPFPLAAQVEATQVHHNKASTSERSRKKLGAGGVAGIVFGVAFVVLLAMSVYHTRVIEDDNSEKHRDIKIPWEYFGIWNCISQPGEICVFNKVQKKPAFSPVHFNEDNLFKAFFTHFLNAAEALFTFKDSLDSPQQFRCSIVKYPCQKQWPCLDCYKLKDPGVITAKIDGNNDIPTLTPLQEAQVDKQGGRRDALIVGVVVSALVVIVIVVIVYICLMRVKRFIRQTSESASSMPSPTVEMGSGNNSHYVNAFSPHYCQNTRQLTILELEQATGNFSESNIIGEGRFGFVYKGLLQDGSIVAIKRRLFALTRDFIPEVKQIADIHHIHLVKLIGYYEDSYQQLLVHEYLPNGNVGNHLYDSEGLPIGRLDLWRRLSIALGTSKGLEHLHSLVPPLVHTNFRTSNVLLDENYNAKVSDYGLCKLQTKVDQAGSSSNVDCFLDPEFSLSQNYSEQSDVYSFGVFLLELISGCEAHNRNMSNPEENLVFQAKNSNGLDKFVDITLGDHERHAARRMMKLALLCVDVTFRRPSMAQIVQELERIQREIAPLCCQVNEEIGVVTLGSELFQ 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3635g00023 631 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Gabi3635g00023 631 SUPERFAMILY Protein kinase-like (PK-like) 321 609 IPR011009 -
Gabi3635g00023 631 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 268 605 IPR047117 -
Gabi3635g00023 631 Pfam Protein tyrosine and serine/threonine kinase 345 602 IPR001245 GO:0004672|GO:0006468
Gabi3635g00023 631 ProSiteProfiles Protein kinase domain profile. 341 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3635g00023 631 Gene3D Transferase(Phosphotransferase) domain 1 414 619 - -
Gabi3635g00023 631 FunFam receptor-like serine/threonine-protein kinase NCRK 315 413 - -
Gabi3635g00023 631 Gene3D Phosphorylase Kinase; domain 1 306 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3635g00023 Gabi-Chr3635 154590 171630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3635g00023 260 605 Receptor kinase-like Gene Family AT1G79620 35.475 1.74e-53 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Gabi3635g00023 PK_Tyr_Ser-Thr 2.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3635g00023 - - aprc:113855951 735.332