Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3635g00004 ATGGAGGGAGATCAACAAGGCTCTAATAATCTCACGTTTCCACCTGGTTTCAGATTCCACCCTTCTGATGAGGAACTCATAGTTCATTACTTGCAAAACAAAATCAGTTCACGTCCACTTCCAGCATCCATTATAGCTGAAATAGATCTGTACAAGTATAATCCGTGGGAGTTACCTAAGAAGTCTTTGTTTGGGGAGGAAGAATGGTATTTCTTTAGCCCCAGGGACAGAAAGTACCCTAATGGATTAAGGCCAAACAGAGCAGCAGCTTCAGGATATTGGAAGGCAACAGGAACTGACAAGCCAATTCTCACTTCTTGTGGATCAAAGCGCATAGGCGTGAAGAAAGCTCTGGTATTTTATTCAGGTCGACCTCCTAAGGGGACTAAGACAGATTGGATCATGAATGAATATAGATTGGTGGACACAACTAACAAACCCTCCACACTAAAAGGTTCCATGAGGTTGGATGACTGGGTACTATGCCGGGTTCGACATAAGGGTTACTCATCCAAGAATTTATGTGAAAATCAAGAGAATCATTGTGAACCAAACTTGCCAGCAAATATACCGAGGAGTGAAGAATACCCAACATACATAAACTTGAGGCCTGACATGGTCACGGATTATCAATATAGAGACTATCAGATCATAGCCTCTATTCTTGTTGGTGGACCTATACCTCCCACTCAGAACATGCCATGTCTAGGCCTTAAGGAAAGCAAAGACAAGAATATAACTTCTGTTTACCAAGATGGTTTCAACAAAGTGAATTCTCAAACGACAACTCCTTCTTTGGACAGTTACTTCAACCCACTGAAAAGAAAATCTAACGAGGATGATCAATATGAAAATCTCATTTCTTTTAACAGGAAGCTCAACAATGAGAACAAAATAGAGGTATCTCCTAGCAAGGTCATCAATTTCCAAGAGCTAAACGAATTAGCCTTTACAGGAAGGTATCCTCAGTGA 972 0.4095 MEGDQQGSNNLTFPPGFRFHPSDEELIVHYLQNKISSRPLPASIIAEIDLYKYNPWELPKKSLFGEEEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKPILTSCGSKRIGVKKALVFYSGRPPKGTKTDWIMNEYRLVDTTNKPSTLKGSMRLDDWVLCRVRHKGYSSKNLCENQENHCEPNLPANIPRSEEYPTYINLRPDMVTDYQYRDYQIIASILVGGPIPPTQNMPCLGLKESKDKNITSVYQDGFNKVNSQTTTPSLDSYFNPLKRKSNEDDQYENLISFNRKLNNENKIEVSPSKVINFQELNELAFTGRYPQ 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3635g00004 323 Pfam No apical meristem (NAM) protein 14 140 IPR003441 GO:0003677|GO:0006355
Gabi3635g00004 323 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 272 - -
Gabi3635g00004 323 FunFam NAC domain-containing protein 72-like 22 172 - -
Gabi3635g00004 323 Gene3D NAC domain 22 170 IPR036093 GO:0003677|GO:0006355
Gabi3635g00004 323 SUPERFAMILY NAC domain 10 167 IPR036093 GO:0003677|GO:0006355
Gabi3635g00004 323 ProSiteProfiles NAC domain profile. 13 167 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3635g00004 Gabi-Chr3635 35563 37302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3635g00004 7 176 NAC Transcription Factor Family AT1G61110 67.978 4.35e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi3635g00004 NAM 3.1e-38 No_clan