Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3635g00003 ATGTCCGTTATCGACATTCTCTTCCGGGTCGACTCCATATGCCAGAAATATGATAAATACGACATTGATAAGCAACGAGAGCTTAATGCCTATGGCGATGACGCCTTCGCTCGCCTCTATGCTGCTGTTGAATCCACCATTCAAGCCGCTCTCAATAAATCCGAGGTTGCTTCTACGGAGAATAACAGGGCAGTTGCAGCGGCTTTGAATGCAGAGGTTCGTCGAGCCAAGGGTAGATTGATGGATGAAGTTCCTAAGCTGCGAAAATTGGTGAATAAGAAGGTTAAAGGTCTCACAAATGAAGATATGGCCATTCGTCAGGATCTTGTTATGGCATTGCCAGAAAGAATCCAAGCAATACCAGATGGTATCACCTCTGCTGCTACTCAAACTGGAGGATGGACTGCTACCACATCTCATCCACATATCAAGTTTGATTCATCAGAGGGACATCTTGACAGTGAATATTTCCATCAAAGTGAAGAATCCAATCAGTTTAGACAAGAGCATGAAATGCGCAAGATGAAACAGGATGAAGGGCTTGATATCATATCAGAGGGATTGGATACCCTGAAGAATCTGGCCCATGATATGAATGAGGAAATAGATCGGCAAGTTCCTTTAATGGATGAAATTGACACAAAGGTAGATAGGGCAACAGCTGATGTGAAAAACACTAACGTAAGGCTGAAGAAAACTCTCACCGAGCTGAGGTCTAGTCGAAATTTCTGCATTGACATCATTCTGCTGTGTGTTCTTCTGGGAATCATTACCTATATATACAAGTAA 789 0.4297 MSVIDILFRVDSICQKYDKYDIDKQRELNAYGDDAFARLYAAVESTIQAALNKSEVASTENNRAVAAALNAEVRRAKGRLMDEVPKLRKLVNKKVKGLTNEDMAIRQDLVMALPERIQAIPDGITSAATQTGGWTATTSHPHIKFDSSEGHLDSEYFHQSEESNQFRQEHEMRKMKQDEGLDIISEGLDTLKNLAHDMNEEIDRQVPLMDEIDTKVDRATADVKNTNVRLKKTLTELRSSRNFCIDIILLCVLLGIITYIYK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3635g00003 262 SMART tSNARE_6 166 233 IPR000727 -
Gabi3635g00003 262 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Gabi3635g00003 262 CDD SNARE_Qc 176 232 - -
Gabi3635g00003 262 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
Gabi3635g00003 262 Gene3D - 169 232 - -
Gabi3635g00003 262 Pfam SNARE domain 208 257 IPR000727 -
Gabi3635g00003 262 PANTHER SYNTAXIN 63 252 IPR045242 -
Gabi3635g00003 262 FunFam Putative syntaxin-71-like 171 232 - -
Gabi3635g00003 262 SUPERFAMILY SNARE fusion complex 163 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3635g00003 Gabi-Chr3635 31908 34017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3635g00003 1 261 SNARE and Associated Proteins AT3G09740 67.300 2.70e-134 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3635g00003 K08506 - gmx:100777251 449.514