Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3634g00064 ATGCGTGCGGAGGCGTCTCCGCCGGAGGCCGCTGCGTTTGAATCATATTTATTGGTGATTCTTTCCGCCCTGCTCTGTGCCCTCATATCGGTGGTGGTGATCGTCGCCGTCGTCCGATGCACGTGGCTCCTGCGTGGCACCGGCGCCGGAAGCTCTTATCGGCAAGCTCTGGCGAACAAGGGCTTGAAGAAGAAGGTGCTCCAGTCGCTTCCCAAGTTCGCCTACGTCGACAGCGACCCGAGCAAGTGGGTGGCTACGCCTGAATGCGCGATTTGCCTGGAGGAGTTTACCGCCGGCGACGACATTCGGGTGCTGCCGCATTGCCGGCACGGTTTCCACGTGGGATGCATAGACGCGTGGCTCGAGTCTCACTCGTCGTGCCCTTCCTGCCGGGAGGTTCTGGCGGTGGCAAGGTGCTAG 420 0.619 MRAEASPPEAAAFESYLLVILSALLCALISVVVIVAVVRCTWLLRGTGAGSSYRQALANKGLKKKVLQSLPKFAYVDSDPSKWVATPECAICLEEFTAGDDIRVLPHCRHGFHVGCIDAWLESHSSCPSCREVLAVARC 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3634g00064 139 FunFam E3 ubiquitin-protein ligase ATL6 51 137 - -
Gabi3634g00064 139 CDD RING-H2_EL5-like 88 131 - -
Gabi3634g00064 139 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 9 134 - -
Gabi3634g00064 139 ProSiteProfiles Zinc finger RING-type profile. 89 131 IPR001841 -
Gabi3634g00064 139 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 50 136 IPR013083 -
Gabi3634g00064 139 Pfam Ring finger domain 88 131 IPR001841 -
Gabi3634g00064 139 SMART ring_2 89 130 IPR001841 -
Gabi3634g00064 139 SUPERFAMILY RING/U-box 66 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3634g00064 Gabi-Chr3634 549084 549503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3634g00064 3 139 C3H Transcription Factor Family AT1G76410 57.343 3.72e-48 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3634g00064 - - gmx:100787383 195.667