Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3634g00062 ATGAGCAAGAACTGGAAATTCAGCTACTTGAGGGATCATGATGGATTTTTGTGCCTTCTAGCGTTTTGTTTGTTGTTTCAGAGTATTGTTTTGAGTTGCTCTTTGAATGAAGAAGGTAAAGCTCTTATGAAGTTGAAGCAAGGAATAGTGAGTGACCCTTTTGATGCTTTGTCAAATTGGGTTGATGATGAAGTAGCTGTTGACCCTTGTAATTGGTTTGGAGTTGAGTGCTCAGATGGAAGAGTGGTGATCTTGAATTTGAAAGACCTTTGTCTTGGAGGCAGTCTGGCACCTGAGCTTGAGAAACTTGTTCATATAAAGTCCATAATTTTACGGAACAATTCTTTTTATGGGATCATTCCTGAAGGAATTGTACACTTGAATGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGAACTCTACCTACAGATCTTGGCAGTAATATTTCACTAACAATACTTTTGCTGGACAATAATGATCTTCTTGATGGTATCTCTCCGGAAATTAATGAATTGAAGATGCTTTCTGAATGTCAAGTAGATGAAAACCAGCTTATTAGTTCAGATAAAATGCCAGGTTGTACAGGAAGATCCATCACACGGCATGTTGGCCAAAATAAAAAGGGTCTTCGGAGCCTACTGCAAACTCCTATTCGTGAAAATCCTTATAATCGTGAAGATACACATAATCGTGCAGCTGCTCCACTTCCCGAAAGCCCTTCTCCATCTCAGCCAGAGCCTCCTTCGGCTTCCCCTCTGCCAGATCCTCCTTCGACTTCCCCATCTGCCTCAGCAACACCACAACTGAAGCCACCTTCCCCTGATCAAAATAATTCTGCTTCTTCTCCCCTACCGACCCCTGGCTCTGCAACACGATCTGAAAGTACCTCATCAAACCATCGAATTGCTATTTTGGCTGGAGTTGGGGGTGGTGCTGTATTTATTCTCATTTCAAGCATTGGCATGTATCTCTGTAAAACCAACAAGGTATCTACCGTAAAACCTTGGGCCACGGGATTAAGTGGACAGCTTCAGAAGGCATTTGTGACAGGTGTGCCAAAGCTAAAGAGATCAGAGCTTGAAGCAGCATGTGAGGATTTCAGTAATGTAATTGGTACTTCATCCATTGGTACAGTTTACAAAGGGACTTTATCTAGCGGTGTTGAAATAGCTGTGGCCTCTGTTACAGAGGCATCATCCAAAAATTGGTCAAAGACTTCAGAAGTTCAATTTAGGAAGAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTAAATCTTCTTGGATATTGTGAAGAAGATGATGAGCCTTTTACCAGAATGGTGGTTTTTGAATATGCCCCAAATGGAACACTCTTTGAGCATCTACACATACAAGAAGCTGAGCACTTGAATTGGGAAACAAGACTTAGAGTTGCTATGGGCACGGCTTATTGCCTGCAACATATGCACCAGTTGGACCCTCCTTTGGCCCATAGTAACCTGAATTCTTCATCTGTACAGCTCACTGATGATTATGCTGCGAAAATCTCGGATTTAAATTTCTTAGCTTCAGCTGAGATAATAAAAGCTGCTGCTAAAAAACACACTGACATGACATTATCAAGTAATGTTTACAGCTTTGGTGTTATATTATTTGAAATGGTAACAGGCAGGCTCCCTTATTCAATGGATAGTCATGGCTCAATTGAAGACTGGGCTTCACACTATTTACAAGGGGATAGGCCCCTCAAGGAAATGGTGGATCCAACTCTATCTTCCTTCAAAGAAGAACAACTGGAACAAGTTGCTACTTTGATTAAATCTTGTGTCCATCCTGATAAAGAGAAGAGACCAACAATGAAAGATGTTAGTATGAGATTAAGAGAGATAACAAAAATAACACCTGAAGCAGCTGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGATTGAGATTTCTTCTTTAGATGCAAGCTGA 1974 0.4083 MSKNWKFSYLRDHDGFLCLLAFCLLFQSIVLSCSLNEEGKALMKLKQGIVSDPFDALSNWVDDEVAVDPCNWFGVECSDGRVVILNLKDLCLGGSLAPELEKLVHIKSIILRNNSFYGIIPEGIVHLNELEVLDLGYNNFSGTLPTDLGSNISLTILLLDNNDLLDGISPEINELKMLSECQVDENQLISSDKMPGCTGRSITRHVGQNKKGLRSLLQTPIRENPYNREDTHNRAAAPLPESPSPSQPEPPSASPLPDPPSTSPSASATPQLKPPSPDQNNSASSPLPTPGSATRSESTSSNHRIAILAGVGGGAVFILISSIGMYLCKTNKVSTVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSSIGTVYKGTLSSGVEIAVASVTEASSKNWSKTSEVQFRKKIDTLSKVNHKNFVNLLGYCEEDDEPFTRMVVFEYAPNGTLFEHLHIQEAEHLNWETRLRVAMGTAYCLQHMHQLDPPLAHSNLNSSSVQLTDDYAAKISDLNFLASAEIIKAAAKKHTDMTLSSNVYSFGVILFEMVTGRLPYSMDSHGSIEDWASHYLQGDRPLKEMVDPTLSSFKEEQLEQVATLIKSCVHPDKEKRPTMKDVSMRLREITKITPEAAVPKLSPLWWAEIEISSLDAS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3634g00062 657 MobiDBLite consensus disorder prediction 241 264 - -
Gabi3634g00062 657 Gene3D Phosphorylase Kinase; domain 1 340 451 - -
Gabi3634g00062 657 Gene3D Transferase(Phosphotransferase) domain 1 452 638 - -
Gabi3634g00062 657 ProSiteProfiles Protein kinase domain profile. 368 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3634g00062 657 PANTHER PROTEIN MALE DISCOVERER 2 18 653 - -
Gabi3634g00062 657 FunFam Nuclear pore complex protein NUP107 35 193 - -
Gabi3634g00062 657 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Gabi3634g00062 657 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Gabi3634g00062 657 Pfam Protein tyrosine and serine/threonine kinase 370 625 IPR001245 GO:0004672|GO:0006468
Gabi3634g00062 657 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Gabi3634g00062 657 Gene3D Ribonuclease Inhibitor 33 230 IPR032675 -
Gabi3634g00062 657 MobiDBLite consensus disorder prediction 265 299 - -
Gabi3634g00062 657 FunFam Inactive receptor-like serine/threonine-protein kinase 342 451 - -
Gabi3634g00062 657 SUPERFAMILY L domain-like 41 191 - -
Gabi3634g00062 657 MobiDBLite consensus disorder prediction 190 205 - -
Gabi3634g00062 657 SUPERFAMILY Protein kinase-like (PK-like) 351 626 IPR011009 -
Gabi3634g00062 657 MobiDBLite consensus disorder prediction 190 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3634g00062 Gabi-Chr3634 519449 523580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3634g00062 16 622 Receptor kinase-like Gene Family AT5G16000 26.845 2.91e-51 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gabi3634g00062 PK_Tyr_Ser-Thr 1.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3634g00062 - - gmx:100784541 919.842