Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3634g00056 ATGAAGGGTTATGAGCCCCGTTCAAGCTCTTCTTGTGCAGCTTGCAAGTTATTGAAAAGAAGATGCATACCCAATTGTATTTTTGCACCATACTTTCGCTCTGATGAGTGTAAGAAATTTGCAAAGGTTCACAAGGTATTTGGAGCAAGCAATGTAAGCAAGATCCTCATTGAAGTCCCAGAAGAACAGAGAGAGGACACGGTGAATTCTCTTGCTTATGAGGCAGAGGCAAGGCTAAGAGACCCAGTTTATGGATGCATTGGTGCCATAGCACTTTTGCAAAGGAAGATGGTGGAGCTTCAACATGATCTTGCCATTGCTAAGGATCGTCTTGCTCGTTGTCATGCTGCTTCTGCTTCTGCTACTGCTGCTACCATATCTTCTTCTGCTGATATCTTGCATGCCCATGTTACCTTGCCTCCATTCCCTGACTTTTCCACTTGCAGTGATTTCAATGATATCTTCTGCCACAACTCTTCATCTCAATTATTGACAAGACATGAAGCGGTGGATGATTTCAATCAAATCCCATATAATATTTTAATGTTATGA 552 0.4203 MKGYEPRSSSSCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARCHAASASATAATISSSADILHAHVTLPPFPDFSTCSDFNDIFCHNSSSQLLTRHEAVDDFNQIPYNILML 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3634g00056 183 Coils Coil 90 110 - -
Gabi3634g00056 183 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Gabi3634g00056 183 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 123 - -
Gabi3634g00056 183 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3634g00056 Gabi-Chr3634 482466 483316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3634g00056 1 145 AS2 family AT3G11090 66.897 1.44e-65 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi3634g00056 LOB 1.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3634g00056 - - gmx:100791250 317.005