Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3634g00039 ATGAAGAAACCACCTTCCTCCGCCGTCAGTGTCTGTTTCGCCGCCGTTTTTATATTCTGTTTTCTACCTTCATCCCATGCTCTTGGCTCCGGCGTCACCCTGGCCATCACCGACGTCTCTGCCACCGTGTGCGGCATCGTAGCAGGTGAATCCACGCAGCGCATTGAGTGTTACCGTCGCGGGGTGATCGTTCCCATCGTCCCCAACGTTTCCTTTTCTTCCATCTCCGGTGGGAAGAACTACTTCTGTGGCATCAGGTCCGGTAACTCTAGTTTGTATTGTTGGGACACTGTCTCTTCCTTCAAAAGGAAAAGACTTTACAACAATGGTTCTGTTCCATTGGAGAATCTTGCTGTTGGGGATGCTCAAGTTTGCACGACGGTGGTAGGTGATGGAACGGTGAGGTGTTGGAGAACCAATGACACGTTTCAATTGCCATCTGGGTCTGATGAATTTGCTTCAATTTCATCTGGGTATGGCTTCTCTTGTGGAATTCTGAGGATTGGTTCTTTGGTTAAGTGTTGGGGAGATATGGATATTGCGAGTCAGATAGAGAATGAGTTTGGAAACATGTCCATGTTGAGTATTGTAGCGGGTGGTTCACATGTTTGTGGGTTGAATTCAACTGGGTTTTTGGTATGCAGAGGGAGTAACAGTTCTGGGCAAGTGAATGTTCCCCAAGGTGGGGCTTTTGAGTATGGTGGGTTAGCATTGGGAGCTGAGCATGGTTGTGCAATTAGAAGATTGAATGGTTCGGTTGTTTGTTGGGGTGGCAATGGTCAATTCTCTGTGAATGTTACAGAAGGAGTTTATTTTGAATTAATTGTTTCTGGGTCCAATTTTACTTGTGGATTGACAACAATAAATTCTTCTGTTGTTTGTTGGGGTCCTGGTTGGTCTAATGGTTCTGATTCTAGCTCAAGGTTTGAGCTTCCCTTATCTCCTATTCTTCCAGGGCCTTGTGTTCAATCTTCTTGTAGTGAGTGTGGTATATATCTTGATTCTCAATCTCTGTGCTCTGGCTCTGGTAACATTTGCAAGCCAAGGCCTTGTGGGCCTCAAGTAACACCACCGCCGTCCCTATCGCCGCCATCACCGCCGCCGCCGCCGCCGCCACTCTCTCCTCCATCATCATCTCGATCGAAGTCCTTGACCAGGGGCTTATTGGCATTTGCCATTGTTGGATCCGTGGGAGCTTTTGCTGGTATTTGCACAATAATTTATTGTTTATGGAGTGGAGTTTGTTTTGGGAAGAAGAAAGTCCATAATTCAGTGCAACCCACAATCACAAGAGGTAGTAGCAGTTCCAATGGTGGGGGTGGTTCCAATAATAGCCGATCTTCAATATCAGCTACAATTAAGCGTCAGAGTTCAAGAATAATGAGACGCCAGAGGAGTGGAACTTCATCATCGAAGCACACAGAGAGGGCTGAGGAGTTCACGCTTGCTGAGCTTGTAGCAGCCACCAACAATTTCTCATTTGAGAACAAGATTGGTGCTGGAAGCTTTGGTGTTGTGTATAGAGGTAAACTCTCTGATGGTCGTGAGGTAGCAATCAAGAGGGGTGATACAGGTTCAAAGATGAAGAAGTTTCAAGAGAAAGAGAGTGCATTTGATTCTGAATTGGCCTTCTTGTCCCGTTTACACCATAAGCACTTGGTTAGGCTAGTTGGGTTCTGTGAAGAGAAAGATGAAAGGCTCTTGGTGTATGAGTACATGATGAATGGGGCATTGTATGATCATTTGCATAACAAGAACAATGTGGAAAAGAGTAGCAGTGTCTTGAATTCATGGAAAATGAGGATCAAAATTGCTTTGGATGCTTCACGAGGAATTGAATATCTCCATAATTATGCAGTTCCATCTATAATTCACAGAGATATCAAGTCTTCCAATATCCTTCTTGACGCGACTTGGACAGCAAGAGTATCTGATTTTGGATTGTCATTGATGAGTCCAGAACCTAACCGTGATTACCAGCCAATGAAAGCAGCAGGAACAGTTGGATACATTGATCCTGAGTACTATGGTCTAAATGTTTTGACAGCAAAGAGTGATGTCTACGGTTTTGGAGTTGTATTGTTAGAACTTTTAACGGGAAAGAGAGCTATATTCAAGCATGGTGAAGATGGAGGAACTCCATTAAGTGTGGTAGACTTTGCAGTGCCAGCTATTTTGGCTGGAGAATTGGTGAAAATTTTGGACCCCAGGGTTGGAGCACCGGAACTGAATGAAAGAGAGGCAGTGGAGTTAGTGGCCTATACTGCTATGCATTGTGTGAATTTGGAAGGGAAAGATAGACCAACTATAGCTGACATTGTGGCCAATTTGGAGCGGGCTTTGCTTATATGTGAAAGTAGCTATGACAGTACAATCTCTATTGTTTCAGACTGA 2394 0.4474 MKKPPSSAVSVCFAAVFIFCFLPSSHALGSGVTLAITDVSATVCGIVAGESTQRIECYRRGVIVPIVPNVSFSSISGGKNYFCGIRSGNSSLYCWDTVSSFKRKRLYNNGSVPLENLAVGDAQVCTTVVGDGTVRCWRTNDTFQLPSGSDEFASISSGYGFSCGILRIGSLVKCWGDMDIASQIENEFGNMSMLSIVAGGSHVCGLNSTGFLVCRGSNSSGQVNVPQGGAFEYGGLALGAEHGCAIRRLNGSVVCWGGNGQFSVNVTEGVYFELIVSGSNFTCGLTTINSSVVCWGPGWSNGSDSSSRFELPLSPILPGPCVQSSCSECGIYLDSQSLCSGSGNICKPRPCGPQVTPPPSLSPPSPPPPPPPLSPPSSSRSKSLTRGLLAFAIVGSVGAFAGICTIIYCLWSGVCFGKKKVHNSVQPTITRGSSSSNGGGGSNNSRSSISATIKRQSSRIMRRQRSGTSSSKHTERAEEFTLAELVAATNNFSFENKIGAGSFGVVYRGKLSDGREVAIKRGDTGSKMKKFQEKESAFDSELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMMNGALYDHLHNKNNVEKSSSVLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDATWTARVSDFGLSLMSPEPNRDYQPMKAAGTVGYIDPEYYGLNVLTAKSDVYGFGVVLLELLTGKRAIFKHGEDGGTPLSVVDFAVPAILAGELVKILDPRVGAPELNEREAVELVAYTAMHCVNLEGKDRPTIADIVANLERALLICESSYDSTISIVSD 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3634g00039 797 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Gabi3634g00039 797 Gene3D Phosphorylase Kinase; domain 1 451 572 - -
Gabi3634g00039 797 Pfam Protein kinase domain 493 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3634g00039 797 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 189 787 IPR044815 GO:0004674
Gabi3634g00039 797 CDD STKc_IRAK 498 779 - -
Gabi3634g00039 797 FunFam serine/threonine-protein kinase-like protein CCR1 461 572 - -
Gabi3634g00039 797 SUPERFAMILY RCC1/BLIP-II 25 262 IPR009091 -
Gabi3634g00039 797 Gene3D Transferase(Phosphotransferase) domain 1 573 789 - -
Gabi3634g00039 797 MobiDBLite consensus disorder prediction 427 467 - -
Gabi3634g00039 797 MobiDBLite consensus disorder prediction 427 475 - -
Gabi3634g00039 797 Gene3D - 23 186 IPR009091 -
Gabi3634g00039 797 Gene3D - 187 346 IPR009091 -
Gabi3634g00039 797 MobiDBLite consensus disorder prediction 356 377 - -
Gabi3634g00039 797 ProSiteProfiles Protein kinase domain profile. 492 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3634g00039 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Gabi3634g00039 797 SUPERFAMILY Protein kinase-like (PK-like) 470 777 IPR011009 -
Gabi3634g00039 797 SMART serkin_6 492 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3634g00039 797 MobiDBLite consensus disorder prediction 356 380 - -
Gabi3634g00039 797 FunFam Serine/threonine-protein kinase-like protein CCR4 573 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3634g00039 Gabi-Chr3634 302374 305000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3634g00039 15 797 Receptor kinase-like Gene Family AT3G55950 60.644 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gabi3634g00039 Pkinase 6.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3634g00039 - - gmx:100786639 1254.58