Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3634g00018 ATGGCTTCTTTTTCAACACTGTTTTTCTGTGTCATCATCATCTTCATCGTCTTTCTCTTCTTCCTCTTTCGAAAATCCCGTTACCGGCGGCTCCGGCTACCGCCGGGGAGCCTCGGCTTGCCCTTCATCGGAGAGACCCTGCAGCTCATATCCGCTTACAAGAGTGACAACCCTGAGCCTTTCATAGACCAGAGAGTGAACCGGTACGGTCCAATCTTCACCACCCACGTTTTTGGCGAGCCGACAGTTTTCTCTGCCGAACCGGAGACGAACCGGTTCATTCTGCTGAACGAAGGGAAGCTCTTTGATTGTAGCTACCCCGGTTCGATATCGAACCTGCTTGGTAAGCACTCTCTGTTGCTGATGAAGGGTTCACTTCATAAGAGAATGCATTCACTCACCATGAGCTTCGCCAACTCATCCATCATCAAGGATCATCTCTTGGTTGACATAGACCGGCTCATCCGGCTCAACTTGGATTCCTGGACCGACCGGGTTTTTCTCATGGAGGAGGCCAAGAAGATAACATTTGAGTTGACAGTGAAGCAGTTGATGAGCTTTGATCCTGATGAATGGACTGAGTCTCTAAGGAAAGAGTACGTTCTTGTGATTGAAGGATTCTTCACTCTCCCCTTTCCTCTCTTCTCCACCACTTACCGCAGAGCCATCAAGGCAAGAAGGAAGGTGGCTGAGGCACTAACGTTGATAGTAAGGCAGAGGAGAAAAGAAAGTGAAAACAAAGAGAAAAAGAAAGACATGCTTGGGGCACTTTTGGCCTCCGGCGACCACTTCTCCGACGAAGAAATTGTGGATTTTATGTTGGCATTGCTCGTCGCCGGCTATGAAACCACCTCTACCATAATGACTCTTGCCGTCAAGTTCCTCACCGAGACTCCTCTAGCCTTAGCACAGCTCAAGGAAGAGCATGACCAAATCAGAGGAAGGAGTAACCCAGAAGCAGCACTGGAATGGACAGATTACAAGTCAATGGCTTTTACTCAATGCGTTGTGAACGAGACCTTAAGGGTGGCAAACATAATCAGTGGAATATTTAGAAGAGCAATGACAGACATCAACATAAAAGGCTACACGATTCCTAAGGGATGGAAGGTGTTTGCATCATTTCGTGCAGTACATCTAAATCCTGAACATTTCAAAGACGCACGCACCTTCAATCCATGGAGATGGCAGGTACCTCATAACTCAGAAGCATCAAGCCCTGGGAATGTATATACACCATTTGGTGGAGGGCCACGCCTATGCCCTGGCTATGAGCTTGCCAGAGTTGTACTTTCTGTTTTCCTTCACCGCATGGTCACTTCCTTCAGTTGGGTTCCTGCAGAGGAAGATAAGTTGGTGTTTTTCCCAACCACAAGGACGCAGAAGAGGTATCCTATTATAGTGAAGCGTAGGGAAGAGTCAGAACATGTATAG 1434 0.4777 MASFSTLFFCVIIIFIVFLFFLFRKSRYRRLRLPPGSLGLPFIGETLQLISAYKSDNPEPFIDQRVNRYGPIFTTHVFGEPTVFSAEPETNRFILLNEGKLFDCSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIKDHLLVDIDRLIRLNLDSWTDRVFLMEEAKKITFELTVKQLMSFDPDEWTESLRKEYVLVIEGFFTLPFPLFSTTYRRAIKARRKVAEALTLIVRQRRKESENKEKKKDMLGALLASGDHFSDEEIVDFMLALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDQIRGRSNPEAALEWTDYKSMAFTQCVVNETLRVANIISGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNPEHFKDARTFNPWRWQVPHNSEASSPGNVYTPFGGGPRLCPGYELARVVLSVFLHRMVTSFSWVPAEEDKLVFFPTTRTQKRYPIIVKRREESEHV 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3634g00018 477 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3634g00018 477 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3634g00018 477 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3634g00018 477 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3634g00018 477 CDD CYP90-like 65 470 - -
Gabi3634g00018 477 Gene3D Cytochrome P450 23 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3634g00018 477 PANTHER CYTOCHROME P450 26 30 445 - -
Gabi3634g00018 477 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3634g00018 477 PRINTS E-class P450 group I signature 334 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3634g00018 477 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3634g00018 477 PRINTS E-class P450 group I signature 374 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3634g00018 477 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3634g00018 477 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3634g00018 477 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3634g00018 477 FunFam Cytochrome P450 90A1 23 471 - -
Gabi3634g00018 477 Pfam Cytochrome P450 210 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3634g00018 477 SUPERFAMILY Cytochrome P450 27 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3634g00018 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3634g00018 Gabi-Chr3634 189083 198697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3634g00018 122 472 Cytochrome P450 AT5G05690 81.250 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3634g00018 K09588 - gmx:100781291 805.053