Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3634g00005 ATGGAGGGGAAGGAGGAAGATGTTGCGTTAGGAGCCAACAAATTCCCAGAGAGACAACCCATTGGAACTGCAGCTCAAAGCCAAGACGATGGCAAAGACTACAAGGAGCCACCACCGGCTCCACTCTTCGAACCCTCCGAGCTCACATCTTGGTCTTTCTACAGAGCAGGCATAGCAGAGTTTGTCGCCACTTTTCTGTTTCTCTACATCACCATCTTAACTGTCATGGGTGTCAACAAAGCTGACTCCAAATGCAAATCTGTTGGTATTCAAGGAATCGCTTGGGCTTTTGGCGGCATGATCTTCGCCCTCGTTTACTGCACCGCTGGCATCTCTGGGGGTCATATAAACCCGGCTGTGACATTTGGCTTGTTCTTGGCGAGGAAATTGTCATTGACTAGGGCGGTGTTCTACATGGTGATGCAGGTGCTTGGTGCTATCTGTGGAGCTGGTGTGGTCAAAGGTTTCGAGGGGAAAGCCATGTACGGAAAGTACAATGGTGGTGCCAATTTTGTTAACAAAGGTTATACTAAAGGTGATGGACTTGGTGCTGAAATTGTTGGTACATTTATTCTTGTCTACACCGTCTTCTCTGCCACTGATGCAAAGCGTAACGCCAGAGACTCTCACGTCCCTCTTTTGGCACCTTTGCCAATTGGGTTCGCTGTGTTCTTGGTGCACATGGCCACCATCCCAATCACTGGAACCGGTATCAACCCTGCTCGTAGTCTCGGTGCTGCCATCGTTTTCAACAAAGACCTTGGCTGGGATGATCATGTACTGGATTTTCTGGGTGGGTCCTTTCATTGGAGCAGCTCTTGCGGCTCTTTACCATCAAGTCGTAATCAGAGCCATTCCCTTCAAATCCAAGTGATTGCTGATTTTCTTCGTTAA 894 0.4866 MEGKEEDVALGANKFPERQPIGTAAQSQDDGKDYKEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVNKADSKCKSVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQVLGAICGAGVVKGFEGKAMYGKYNGGANFVNKGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPLLAPLPIGFAVFLVHMATIPITGTGINPARSLGAAIVFNKDLGWDDHVLDFLGGSFHWSSSCGSLPSSRNQSHSLQIQVIADFLR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3634g00005 297 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Gabi3634g00005 297 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 265 IPR034294 -
Gabi3634g00005 297 Pfam Major intrinsic protein 47 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3634g00005 297 Gene3D Glycerol uptake facilitator protein. 40 273 IPR023271 -
Gabi3634g00005 297 CDD MIP 55 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3634g00005 297 FunFam Probable aquaporin PIP1-2 40 272 - -
Gabi3634g00005 297 NCBIfam MIP family channel protein 59 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3634g00005 297 MobiDBLite consensus disorder prediction 1 39 - -
Gabi3634g00005 297 SUPERFAMILY Aquaporin-like 47 260 IPR023271 -
Gabi3634g00005 297 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3634g00005 297 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3634g00005 297 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3634g00005 297 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3634g00005 297 PRINTS Major intrinsic protein family signature 220 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3634g00005 Gabi-Chr3634 18018 20367 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3634g00005 1 290 Major Intrinsic Protein MIP AT2G45960 79.655 2.20e-172 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3634g00005 K09872 - gmx:100791447 491.115