Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3634g00002 ATGGCGGCGAGCGATCGCACAGTGTTGCAGTTCCCTTCTTCTTCTTCATCGCCGAGCTTGTCGGCGAAGGTCCACCCTCTTGTTATCTTCAACATCTGCGACTGCTACGTTCGTCGCCCTGACCAAGCCGAACGCGTCATCGGAACCCTACTCGGCTCCGTTCTTCCCGATGGAACTGTTGATATCCGTAATTCATATGCCGTTCCTCACAACGAGTCCGTCGACCAGGTTGCTTTGGATATTGAGTACCACCACAATATGTTAATATCTCACCAAAAAGTGAATCCAAAGGAAATCATAGTTGGATGGTATTCAACTGGTCTTGGAGTAACTGGTGGTAGTGCATTAATCCATGAATTTTATTCTCGAGAAGTACCAAATCCCATACATTTGACTGTTGATACAGGATTCACAAATGGAGGGGGTACCGTAAAAGCGTATGTGTCAAACACTTTATCTCTTGGAGACCGGCAAATTGCTGCACACTTTCAAGAAGTTCCATTGGATCTTCGTATGGTTGAAGCTGAGCGAATTGGATTTGATACCCTGAAGTCAACCACTGTTGACAAAATTCCCTCCGATTTAGAAGGGATGGAAACATCAATGGAACATTTACTAGCCTTGATTGATGACATTCACAAATATGTTGACGATGTTGTGGAAGGGCGTGTTGCACCAGACAACAAAATTGGGAGATTTATATCAGATGCTGTAGGCTCCCTTCCCAAATTGCCCCCATCAGTTTTTGATAAGCTTGTGAATGACAGCTTGCAGGATCACTTGCTCTCGTTATATTTAGCTAGCATCACAAGAACACAGCTTAGCTTGGCCGAAAAATTGAATACAGCTGCTCAGATTCTGTGA 864 0.4456 MAASDRTVLQFPSSSSSPSLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNESVDQVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHEFYSREVPNPIHLTVDTGFTNGGGTVKAYVSNTLSLGDRQIAAHFQEVPLDLRMVEAERIGFDTLKSTTVDKIPSDLEGMETSMEHLLALIDDIHKYVDDVVEGRVAPDNKIGRFISDAVGSLPKLPPSVFDKLVNDSLQDHLLSLYLASITRTQLSLAEKLNTAAQIL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3634g00002 287 MobiDBLite consensus disorder prediction 1 20 - -
Gabi3634g00002 287 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 21 125 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gabi3634g00002 287 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 13 284 - -
Gabi3634g00002 287 ProSiteProfiles MPN domain profile. 22 153 IPR037518 -
Gabi3634g00002 287 CDD MPN_eIF3f 23 280 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Gabi3634g00002 287 SMART pad1_6 21 152 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gabi3634g00002 287 FunFam Eukaryotic translation initiation factor 3 subunit F 9 188 - -
Gabi3634g00002 287 Pfam Maintenance of mitochondrial structure and function 174 280 IPR024969 -
Gabi3634g00002 287 Hamap Eukaryotic translation initiation factor 3 subunit F [EIF3F]. 20 283 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Gabi3634g00002 287 Gene3D Cytidine Deaminase, domain 2 9 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3634g00002 Gabi-Chr3634 10916 15076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3634g00002 2 287 Eukaryotic Initiation Factors Gene Family AT2G39990 76.632 1.48e-161 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3634g00002 K03249 - gmx:100811797 519.62