Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi362g00005 ATGGGTTCTTCCATTCCCACCTTCTTCTTCTTCTTCTTCTTCTTCTGCTTCCTTCTCTTCCTATCATCGTCATCATCATCAATATCCAATGCTGCAACCAAGAAGACATACATAGTTCACATGAAGCACCATGAAAAGCCTTCCATGTACACCACCCACCATGACTGGTACTCAGCCAGTCTTCAATCACTGTCAACTTTCACTTCCACAGATTCCGATCCCCTCTTATATTCCTACACCGACGCATACAGCGGTTTCGCCGCATCCCTTGACACTCACCAAGCCCAGGAACTGTTAAGATCTGATGCGGTTCTTGGCCTCTACGAGGACACAGTGTACCAACTTCACACCACACGCACACCACAGTTTCTGGGTCTCGAAATCCAAACAGGGTTATGGGAAGGCCATCGTACACAGGAACTGGACCAAGCGTCCCACGATGTTATCATAGGGGTGTTAGACACCGGAATATGGCCCGAATCTCAGAGCTTCGTCGACGCCGGAATGCCGGAGATACCAGCGCGGTGGCGCGGCGAGTGTGAGAAGGGCCCTGATTTTTCACCTTCTCTCTGCAACAAAAAGCTCATCGGCGCACGAAGCTTCTCCAGGGGGTTCCACATGGCGGCGGGGAGCGGCGCCGAGAAAGAGCCTATGTCACCTCGCGATAGGGACGGTCACGGGACCCACACCGCGAGCACCGCCGCTGGGTCCCACGTGGCAAATGCTAGCCTCCTCGGCTACGCCAGCGGAACCGCCAGAGGCATGGCGCCGCAGGCGCGTGTCGCTGGTTACAAGGTTTGCTGGTCCGACGGTTGCTTCGCCTCCGACATTCTCGCCGGGATGGACCGCGCGATCCAGGACGGCGTCGACGTGTTATCCCTCTCCCTCGGCGGCGGCTCCGCCCCTTATTTCCGCGACACCATCGCAATCGGAGCATTCGCGGCGGTGGAGCGAGGGATCTTTGTTTCCTGCTCCGCCGGGAATAGCGGGCCTAGTAAGGCGTCACTTGCGAATGTAGCGCCGTGGATTATGACCGTTGGGGCTGGGACCCTGGACCGGGATTTCCCGGCTTTCGCATTGTTAGGAAACAAGAAACGGTTCGCTGGGGTTTCGCTTTACAGTGGGAAGGGAATGGGGAGTGAACCGGTGGGTTTGGTTTATAACAAAGGGTCGAGCTCGAACTCGAACTCGAACTCGAACTCGAACCAATCGGCTAGCATTTGTATTCCCGGTTCGCTTGACCCGGCCGTGGTTCGTGGGAAGATAGTTATTTGCGACAGGGGGCTTAATGCGCGCGTGGAGAAAGGTAAGGTCGTGTTGGATGCAGGTGGGGTTGGGATGATACTGGCGAACACGGCGGCGAACGGCGAGGAGTTGGTGGCGGATAGTCACTTGCTACCGGCTGTAGCGGTTGGGAGAATCGTGGGTGATCAGATCAGGGAGTATGCGGGTTCAGATCGTAATCCAACGGCAATGCTGAGTTTCGGTGGGACCGTTTTGAACGTTAGACCATCCCCTGTGGTGGCAGCGTTCAGTTCGAGAGGGCCCAATACGGTGACTAGGCAGATACTAAAACCGGATGTTATTGGGCCTGGTGTTAACATCTTAGCCGGATGGTCAGAATCTATTGGGCCTTCTGGGTTATCTCAGGACACTCGTAAAACACAATTCAACATTATGTCAGGTACGTCGATGTCTTGTCCACATATAAGTGGGTTGGGTGCATTGTTGAAAGCAGCTCATCCAGATTGGAGCCCAAGCGCAATAAAATCTGCACTCATGACAACAGCATATACCCATGACAACACCAAGTCACCACTCCATGATGCATCAGGAGAAGCCTTTTCAACTCCATGGGCTCACGGTGCGGGCCATGTTAACCCACAGAAAGCATTCTCTCCGGGCCTTGTCTATGATGCTTCAGCCAGTGATTACATTGCGTTCTTGTGCTCCTTGGACTACACACCTGAGCACATACAACTTGTTGTTAAGCAACCTGGTGTCAATTGTACCATGAAATATTCTGATCCTGGCCAATTGAATTACCCATCATTCTCGGTCTTGTTTGGAGGCAAAAGGGTTGTGAGATACACGCGCACCCTGACAAACGTTGGTGATGCTGGATCTGTCTATCATGTGGCCGTTGACGGGCCATCAACGGTGGGGATAACGGTGAATCCCACCAGGCTTGTGTTTGGAAAAGTAGGGGAAAAACGAAGGTACACTGCGACCTTTGTGTCCAAGAAGGGTGCTGATGCTTCGGTTAGGTCTGGATTTGGGAGCATTATGTGGAGCAATGCACAGCACCAAGTTAGGAGCCCAGTTGCTTTTGCTTGGACAGAGTTGTGA 2349 0.5343 MGSSIPTFFFFFFFFCFLLFLSSSSSSISNAATKKTYIVHMKHHEKPSMYTTHHDWYSASLQSLSTFTSTDSDPLLYSYTDAYSGFAASLDTHQAQELLRSDAVLGLYEDTVYQLHTTRTPQFLGLEIQTGLWEGHRTQELDQASHDVIIGVLDTGIWPESQSFVDAGMPEIPARWRGECEKGPDFSPSLCNKKLIGARSFSRGFHMAAGSGAEKEPMSPRDRDGHGTHTASTAAGSHVANASLLGYASGTARGMAPQARVAGYKVCWSDGCFASDILAGMDRAIQDGVDVLSLSLGGGSAPYFRDTIAIGAFAAVERGIFVSCSAGNSGPSKASLANVAPWIMTVGAGTLDRDFPAFALLGNKKRFAGVSLYSGKGMGSEPVGLVYNKGSSSNSNSNSNSNQSASICIPGSLDPAVVRGKIVICDRGLNARVEKGKVVLDAGGVGMILANTAANGEELVADSHLLPAVAVGRIVGDQIREYAGSDRNPTAMLSFGGTVLNVRPSPVVAAFSSRGPNTVTRQILKPDVIGPGVNILAGWSESIGPSGLSQDTRKTQFNIMSGTSMSCPHISGLGALLKAAHPDWSPSAIKSALMTTAYTHDNTKSPLHDASGEAFSTPWAHGAGHVNPQKAFSPGLVYDASASDYIAFLCSLDYTPEHIQLVVKQPGVNCTMKYSDPGQLNYPSFSVLFGGKRVVRYTRTLTNVGDAGSVYHVAVDGPSTVGITVNPTRLVFGKVGEKRRYTATFVSKKGADASVRSGFGSIMWSNAQHQVRSPVAFAWTEL 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi362g00005 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 562 572 IPR023828 -
Gabi362g00005 782 CDD PA_subtilisin_like 361 491 - -
Gabi362g00005 782 Gene3D Peptidase S8/S53 domain 147 645 IPR036852 GO:0004252|GO:0006508
Gabi362g00005 782 Pfam PA domain 398 479 IPR003137 -
Gabi362g00005 782 SUPERFAMILY Subtilisin-like 115 636 IPR036852 GO:0004252|GO:0006508
Gabi362g00005 782 ProSiteProfiles Serine proteases, subtilase domain profile. 129 632 - -
Gabi362g00005 782 FunFam Subtilisin-like protease SBT1.5 649 780 - -
Gabi362g00005 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 116 IPR037045 -
Gabi362g00005 782 Pfam Fibronectin type-III domain 679 776 IPR041469 -
Gabi362g00005 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 776 IPR045051 -
Gabi362g00005 782 FunFam Subtilisin-like protease SBT1.5 147 364 - -
Gabi362g00005 782 FunFam subtilisin-like protease SBT1.5 352 500 - -
Gabi362g00005 782 CDD Peptidases_S8_3 113 598 IPR034197 -
Gabi362g00005 782 Gene3D - 352 500 - -
Gabi362g00005 782 FunFam Subtilisin-like protease SBT1.9 24 116 - -
Gabi362g00005 782 Gene3D - 649 779 - -
Gabi362g00005 782 Pfam Subtilase family 146 600 IPR000209 GO:0006508|GO:0008236
Gabi362g00005 782 MobiDBLite consensus disorder prediction 210 233 - -
Gabi362g00005 782 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Gabi362g00005 782 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Gabi362g00005 782 PRINTS Subtilisin serine protease family (S8) signature 561 577 IPR015500 -
Gabi362g00005 782 Pfam Peptidase inhibitor I9 36 116 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi362g00005 Gabi-Chr362 131680 134106 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi362g00005 15 782 Subtilisin-like Serine Gene Family AT2G05920 67.445 0.0 1065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi362g00005 - - gmx:100797543 1239.17