Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi362g00004 ATGAGCACCATATGGAGATCCATCTTCTCTAGTTGTTATGAGGGTGAGGGATACTCACCCAAGTCCAAGAAAGTGGTGTCTACAAAGCCTAATTCTTCTCCCAGGATTTCTGTAAATGATTTGAGTTATCCAAGCACGACTCTTACAGAGGATCTTTCCATTTCTCTAGCAGGATCTAACCTGTATGTTTTTTCACTTGCTGAACTCAAGATTATCACTCAGCACTTCTCCTCAAGTAATTTTCTAGGAGAAGGTGGGTTCGGACCAGTGCATAAGGGTTTCATTGATGACAAGCTTAGGCCTGGTCTAAAGGCTCAGCCTGTGGCTGTTAAGCTCTTGGACTTGGATGGATCACAGGGCCATAAAGAGTGGTTGACTGAAGTTGTTTTTCTGGGGCAATTAAGGCATCCACACCTTGTGAAGCTTATAGGATATTGCTGTGAAGAAGAACACAGGCTTTTGGTATATGAATATTTAACAAGAGGCAGCTTAGAGAATCAGTTATTTCGAAGATATTCAGCATCACTATCATGGTCAACAAGAATGAAAATTGCTGTTGGAGCTGCAAAGGGTTTAGCCTTTCTTCATGAAGCAGAGAAACCAGTCATCTATAGAGATTTCAAAACTTCGAACATCTTGTTAGACTCTGATCACAACGCAAAACTCTCTGATTTTGGGTTGGCAAAAGATGGTCCTGAAGGTGATGACACCCACGTTTCAACCCGAGTCATGGGAACCCAAGGCTATGCCGCCCCAGAATATGTCATGACAGGTCACTTGACAGCAATGAGTGATGTGTATAGCTTTGGAGTAGTGCTGTTGGAGCTTATAACAGGAAGAAGGTCAGTGGACAAGAATCGCCATCCAAGGGAGCATAATCTAGTGGAATGGGCAAGGCCAATGTTAAATGATTCAAGAAAACTTAGCAGGATAATGGATCCAAGGCTTGAAGGACAATACTCTGAGATGGGAACAAAAAAAGCAGCTGCATTGGCTTATCAATGCCTTAGCCATAGGCCAAGGAACAGGCCTACAATGAGCACAGTGGTTAAGACTCTTGAACCACTCAAAGATTTTGATGATATTCCAATTGGACCATTTGTTTACACAGTTCCAACTGATAATAATGAAGTGCATAAAGATGCAAAGGAATATGAATCACCAAAGGAGAGGAAGAGGGAAAATGGTGGTCACCATCACCCGAATCACCATCTCAAAAATGGCCGCAGGCATCCACTAAAATCCCCCAAGACACGTTCATCACAGTCACAGTCTCATTCGCAGAATGAAAAACACCAAAATGGAAGAAGAAGTGAGTCAAACTCTCCTCCATCAAATCAGCTAAGGCAAGGAAGAATAGCTTAA 1365 0.4256 MSTIWRSIFSSCYEGEGYSPKSKKVVSTKPNSSPRISVNDLSYPSTTLTEDLSISLAGSNLYVFSLAELKIITQHFSSSNFLGEGGFGPVHKGFIDDKLRPGLKAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLVYEYLTRGSLENQLFRRYSASLSWSTRMKIAVGAAKGLAFLHEAEKPVIYRDFKTSNILLDSDHNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAMSDVYSFGVVLLELITGRRSVDKNRHPREHNLVEWARPMLNDSRKLSRIMDPRLEGQYSEMGTKKAAALAYQCLSHRPRNRPTMSTVVKTLEPLKDFDDIPIGPFVYTVPTDNNEVHKDAKEYESPKERKRENGGHHHPNHHLKNGRRHPLKSPKTRSSQSQSHSQNEKHQNGRRSESNSPPSNQLRQGRIA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi362g00004 454 Gene3D Transferase(Phosphotransferase) domain 1 159 362 - -
Gabi362g00004 454 MobiDBLite consensus disorder prediction 376 395 - -
Gabi362g00004 454 PANTHER OS01G0588500 PROTEIN-RELATED 38 357 - -
Gabi362g00004 454 SUPERFAMILY Protein kinase-like (PK-like) 52 354 IPR011009 -
Gabi362g00004 454 Gene3D Phosphorylase Kinase; domain 1 40 158 - -
Gabi362g00004 454 Pfam Protein tyrosine and serine/threonine kinase 80 353 IPR001245 GO:0004672|GO:0006468
Gabi362g00004 454 MobiDBLite consensus disorder prediction 369 454 - -
Gabi362g00004 454 MobiDBLite consensus disorder prediction 438 454 - -
Gabi362g00004 454 FunFam Probable serine/threonine-protein kinase PBL8 159 368 - -
Gabi362g00004 454 ProSiteProfiles Protein kinase domain profile. 76 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi362g00004 454 FunFam Serine/threonine-protein kinase BIK1 44 158 - -
Gabi362g00004 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Gabi362g00004 454 MobiDBLite consensus disorder prediction 396 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi362g00004 Gabi-Chr362 81645 84370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi362g00004 64 353 Glycoside Hydrolase AT3G07070 53.584 3.16e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gabi362g00004 PK_Tyr_Ser-Thr 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi362g00004 - - gmx:100783759 750.355