Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3628g00035 ATGGCGGTGGGAGAGAGCATTGTCACTATCTTTCTTCTCCTTATGCTTCTTCTCGTCATCATCCTTGTCTTCTTCGCCTGCAAACCATGGCGCTTCTTTTTCGCTTCCCCTTCCCTCTCCTCCATCAAGGCTGATGAGCTGGAGAGGCCCCTTGTTGTAGATGACATAAATGTGTCACATAGCCAGAGCTCTGAATTGCCTCGAAATTATGATCTTGAGGGTGCCTGCTATCCAAATGAAAGTAATTTTCTCTCGCCTCGCACCCATGAACTTGTTTATAAGCAAAGGCTTCCTGCCGTTTCTCTTTCTTCTAATGCGCCTCATGGGGATAGTTCAGTTTTAGATGTAATTTCTGATCCTTCAGAAGATGTTGTTGTTGGTCAAAAGCATAGCAGAGCAAATTTTGAAAATGATAGACTGCAAGACTTTGTGCAAAGAGATATTCTTGATCAAAGAAGTTGCCTCACACTGGAGGTTATCGATGGTCCTTCTCGTGGACTTCGTTGTTCTGTACAGTCAACGAATCCCTCTCATCTACCACTGGCCTTAGGAAGAGTTTCTCCAAGTGATTTGTTGATAAATGATTCAGAAGTGTCAGGAAAGCATGCTCTGATAAAGTGGAATTTGGATAAAATGAAATGGGAGTTGGTAGATATGGGTAGCCTAAATGGAACGCTTTTGAATTCTCGGCCAATCAACCACGCAGACTCTGGAAGCAGGCATTGGGGTGATCCAATGGATCTTGCTAATGGAGATATCATAACACTTGGAACAACATCAAAAGTAATTGTTGATATTACTACACAAAATCAGCAGCACATTCCCTTTGGAGTGGGTATGGCATCAGATCCCATGACGTTGCATCGAGGTGGAAAAAAGTTGACTATGGAAGATGTTTGCTATTATCAATGGCCTCTAACTGGACTGGATCAGTTTGGGCTGTTTGGCATTTATGATGGTCATGGTGGAGATGGGGCTGCCAAATCTGCTAGCAAACTTTTTCCTGAGATAATTGCTGGTATATTATCAAATACATTAAGACGAGAGAGGGTTTTATCTCTCCGTGATGCTTCAGATGTTCTTCGAGATGCATTTTCTCAAACAGAAGCATCCATAAATCACCATTATGAGGGATGCACAGCAACAGTGCTCCTGGTGTGGGCTGATGGTGATGGAAACTTTTTTGCGCAATGTGCAAATGTTGGAGACTCTGCCTGTATAATGAGTATTGATGGCAAGCAATTCAAGATGACAGAAGATCATAAGATAGCAAATTATTCTGAAAGACTAAGAATTGAAGAGACGGGTGAACCATTGAAAGATGGGGAAACACGACTATATGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTCCTGAAACAGCAGGATTCACGGTTCAGTTCAGAGCCTCATATAAGTGAAGTCGTGCATATTGGCCAATCAAGCAGGGCTTTCGCCATTCTAGCTAGTGATGGATTATGGGATGTCATCAGCATGAAAAAGGCAATTCAGCTAGTGCTTCAGATGAGGGAGAGACACTCCAGAGAGACACAGAATTCAGCAGAAAAGATTGCCCATTTCTTGTTAAGTGAGGCTAAAACACTCAGAACGAAGGATAATACCTCTGTAATCTTCTTAGATTTTGATTCCTTCACCTGA 1662 0.4242 MAVGESIVTIFLLLMLLLVIILVFFACKPWRFFFASPSLSSIKADELERPLVVDDINVSHSQSSELPRNYDLEGACYPNESNFLSPRTHELVYKQRLPAVSLSSNAPHGDSSVLDVISDPSEDVVVGQKHSRANFENDRLQDFVQRDILDQRSCLTLEVIDGPSRGLRCSVQSTNPSHLPLALGRVSPSDLLINDSEVSGKHALIKWNLDKMKWELVDMGSLNGTLLNSRPINHADSGSRHWGDPMDLANGDIITLGTTSKVIVDITTQNQQHIPFGVGMASDPMTLHRGGKKLTMEDVCYYQWPLTGLDQFGLFGIYDGHGGDGAAKSASKLFPEIIAGILSNTLRRERVLSLRDASDVLRDAFSQTEASINHHYEGCTATVLLVWADGDGNFFAQCANVGDSACIMSIDGKQFKMTEDHKIANYSERLRIEETGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPHISEVVHIGQSSRAFAILASDGLWDVISMKKAIQLVLQMRERHSRETQNSAEKIAHFLLSEAKTLRTKDNTSVIFLDFDSFT 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3628g00035 553 Gene3D - 150 285 - -
Gabi3628g00035 553 FunFam Protein phosphatase 2C 70 150 284 - -
Gabi3628g00035 553 ProSitePatterns PPM-type phosphatase domain signature. 314 322 IPR000222 GO:0043169
Gabi3628g00035 553 SMART PP2C_4 271 547 IPR001932 -
Gabi3628g00035 553 CDD PP2Cc 288 549 IPR001932 -
Gabi3628g00035 553 SUPERFAMILY PP2C-like 289 550 IPR036457 -
Gabi3628g00035 553 CDD FHA_PP2C70-like 155 264 - -
Gabi3628g00035 553 SMART FHA_2 180 232 IPR000253 GO:0005515
Gabi3628g00035 553 Pfam FHA domain 183 257 IPR000253 GO:0005515
Gabi3628g00035 553 Gene3D - 286 552 IPR036457 -
Gabi3628g00035 553 PANTHER PROTEIN PHOSPHATASE 2C 279 546 IPR015655 GO:0004722|GO:0006470
Gabi3628g00035 553 FunFam Protein phosphatase 2C 70 285 553 - -
Gabi3628g00035 553 SUPERFAMILY SMAD/FHA domain 153 264 IPR008984 GO:0005515
Gabi3628g00035 553 ProSiteProfiles PPM-type phosphatase domain profile. 277 549 IPR001932 -
Gabi3628g00035 553 ProSiteProfiles Forkhead-associated (FHA) domain profile. 181 232 IPR000253 GO:0005515
Gabi3628g00035 553 Pfam Protein phosphatase 2C 292 542 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3628g00035 Gabi-Chr3628 308007 312842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3628g00035 3 551 PP2C-type Phosphatase Gene Family AT5G19280 56.419 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3628g00035 K01090 - gmx:100170642 814.298