Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3628g00005 ATGTGTATCTTCAAATCCTCTGCAACCCACTTGCTACTTCTTTCTCTGTTTTCGTTGCTAAGCTTTGCAAGTGAAGCAGCTCCAATATACAGCGCTCATGACTGCACAAATGGATCTTATTACCAACCCAACACAACTTTCCAAGCCAACTTAAAAGTCCTCCTCTCATCCCTTGTCTCCAACGCCACCCTCCACGACGGTTTCTACAGCACCAACATCTCCCTCGGAAACCCTGGCCAGGTCAAGGGACTCTTCCTCTGCCGCGGTGACGTCACCCCCACCGTCTGTCAACAGTGTGTCACCGCCGCAGCCATGAACATTACACGCTTCTGCACCAACCAAACAGAATCCATCATCTGGTACGACGTTTGTATGCTCCGTTACTCCGACAACTTCCCCTTAAACAACATAGTCCCAGGAATGAACTTAAAGGCCGATGATAGCGTCCCCAACTCAGACCTTACCCAGTTCAATGATTTACTGTCATCCACGTTGAATGATATAACACAGAAAGCTGTGAATTCTCCTTCGGATAAGAAGTTTGCTGCAAAAGAAGCAAATTTCACGAGCTCAATGAAGCTCTACACACTGGCACAGTGCACGCCCGATTTGTCCACTTTTGATTGTAACAGGTGTTTCTCAAGCGCCATTAGTGCTCTTCCAAATTGCTGTAGTGGGAAACGAGGTGCAAGAACCCTGCTTCCGAGTTGTAATATCAGATACGAATTGTACCCATTTTACAATGCCTCGGCGGTATCGACTCAACCAGAGCTTTCGTCTCCTTCATCAGTTGGGGATGATCTTATAGATGTGGAGTCCTTGCAATTTGACTTGGCTACAGTTGAAGCTGCCGCAAACAGCTTCGCGGATGAGAACAAGATCGGCCAAGGTGGATTTGGCGTGGTTTATAAGGGTATCCTCCCTAACGGACAGGAGATAGCTGTGAAGAGGTTGTCGGTAACCTCCTTGCAGGGTACAGTAGAGTTTACGAATGAAGCTATCCTTGTGGCTAAGCTTCAACATAGAAATTTAGTGAGGCTGTTGGGATTTTGCTTGGAGGGGCAGGAGAAGATGCTTATCTATGAATACATACCAAACAAAAGCCTCGATCGCTTTCTATTTGATCCTGTAAAGCAAAGAGAGTTAGATTGGTCAAGACGCTACAATATCATTGTTGGTATTGCTCGAGGAATTCTTTATCTCCATGAAGATTCCCAGCTTAGAATTATACATCGTGATCTCAAAGCTAGCAATGTTCTACTGGATGAAAAGATGAACCCAAAGATTTCAGATTTTGGCATGGCAAAAATTTTCCAGCCAGATCAGACTCAAGTAAATACAGGAAGGATAGTTGGAACTTATGGTTACATGTCTCCAGAATATGCATTGCGTGGACAATTCTCTGTGAAATCAGATGTGTTCAGCTTTGGTGTCTTAGTTTTGGAGATTGTGAGTGGCAAGAAGAACACTGATTTTTATCAAACTGGACATGCTGATGACCTCTTAAGCTATGTTTGGAAAAATTGGACAGAGCAAACACCTTTGGAATTGCTGGATCCAACCCTGAGAGATTCTTATTCAAGAAACGAAGTCATCAGATGCATCCATATTGGTTTATTGTGCGTTCAGGAAAATCCATCTGACAGGCCTTCGATGGCAACTATTTCACTTATGTTGAACAGTTATACAGTTACCATGTCATTACCTCGAAAGCCAGCATCTTTCCTGCATGGAAGAACACCTAACAGGCTAAAAAATGGGCTTGATTCTGATCAGTCCACCAACTGTTCAATTCCATCAATTCCGTGGTCTAATAATGAAGTATCCATTACTGAAGTATACCCTCGATAA 1851 0.4387 MCIFKSSATHLLLLSLFSLLSFASEAAPIYSAHDCTNGSYYQPNTTFQANLKVLLSSLVSNATLHDGFYSTNISLGNPGQVKGLFLCRGDVTPTVCQQCVTAAAMNITRFCTNQTESIIWYDVCMLRYSDNFPLNNIVPGMNLKADDSVPNSDLTQFNDLLSSTLNDITQKAVNSPSDKKFAAKEANFTSSMKLYTLAQCTPDLSTFDCNRCFSSAISALPNCCSGKRGARTLLPSCNIRYELYPFYNASAVSTQPELSSPSSVGDDLIDVESLQFDLATVEAAANSFADENKIGQGGFGVVYKGILPNGQEIAVKRLSVTSLQGTVEFTNEAILVAKLQHRNLVRLLGFCLEGQEKMLIYEYIPNKSLDRFLFDPVKQRELDWSRRYNIIVGIARGILYLHEDSQLRIIHRDLKASNVLLDEKMNPKISDFGMAKIFQPDQTQVNTGRIVGTYGYMSPEYALRGQFSVKSDVFSFGVLVLEIVSGKKNTDFYQTGHADDLLSYVWKNWTEQTPLELLDPTLRDSYSRNEVIRCIHIGLLCVQENPSDRPSMATISLMLNSYTVTMSLPRKPASFLHGRTPNRLKNGLDSDQSTNCSIPSIPWSNNEVSITEVYPR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3628g00005 616 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 613 - -
Gabi3628g00005 616 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 253 363 - -
Gabi3628g00005 616 FunFam Cysteine-rich receptor-like protein kinase 10 141 246 - -
Gabi3628g00005 616 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Gabi3628g00005 616 SMART serkin_6 288 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3628g00005 616 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Gabi3628g00005 616 Pfam Protein tyrosine and serine/threonine kinase 291 556 IPR001245 GO:0004672|GO:0006468
Gabi3628g00005 616 Gene3D - 143 246 IPR038408 -
Gabi3628g00005 616 Gene3D - 29 132 IPR038408 -
Gabi3628g00005 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Gabi3628g00005 616 Gene3D Transferase(Phosphotransferase) domain 1 364 569 - -
Gabi3628g00005 616 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 132 - -
Gabi3628g00005 616 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Gabi3628g00005 616 Pfam Salt stress response/antifungal 152 244 IPR002902 -
Gabi3628g00005 616 ProSiteProfiles Protein kinase domain profile. 288 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3628g00005 616 CDD STKc_IRAK 294 560 - -
Gabi3628g00005 616 SUPERFAMILY Protein kinase-like (PK-like) 274 583 IPR011009 -
Gabi3628g00005 616 Gene3D Phosphorylase Kinase; domain 1 250 363 - -
Gabi3628g00005 616 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Gabi3628g00005 616 FunFam cysteine-rich receptor-like protein kinase 10 364 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3628g00005 Gabi-Chr3628 18358 21372 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3628g00005 4 616 Receptor kinase-like Gene Family AT4G05200 46.302 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi3628g00005 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3628g00005 - - gmx:547727 947.962