Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3615g00043 ATGTCTAAAGAAGTCACTGCTACTCCATCAGCTGCTTCTCTGGGGTATGTGTTCTTGGATGATGATCCTGGCATCCTTGGAACTGTTAAAGCCTCATCCAATCGCACAAATCCATGGATTGAACCTGAAAGGTTGAAACTCAGACACAGAATTGGTCGGGGCCCCTTTGGTGATGTCTGGCTAGCAACTCATCATCAGTCAACTGAAGATTATGACGAGTACCATGAAGTTGCTGCTAAGATGTTATATCCAATCAGAGAGGATCATATGAAGATTGTATTGGAGAAATTTAACGAATTATATATTAAGTGCCAAGAAGTTGCTAGCGTTTGCTGGCTACATGGAATTTCTATCTTAAATGGAAGGATATGCATCATTATGAATTTGTATGAGGGTTCAATTGGTGATAAGATGGCTAGACTTAGAGAAGGAAGGATTTCGTTGCATGATGTTTTGAGGTATGGAATCAATCTGGCTCAAGGTATTCTGGAACTTCACTCTAAAGGAGTCATCATTCTCAACCTTAAACCATTTAACGTTCTTCTCAATGATAATGATCAAGCAATTTTGGGAGATGTTGGTATTCCCAGTCTTTTGCTTGGCTCCTCATTCTTAAACTTAGATATGGCTCAGAGGCTTGGAACTCCAAATTACATGGCTCCAGAGCAATGGGAACCAGAGGTCAGAGGCCCTATATCCTTTGAAACGGATTCATGGGGATTTGGGTGCACCATTGTCGAAATGTTGACTGGTAATCAACCTTGGTACGGATGTCCTGTTGGTGGGATATACCAATCGGTGGTTGAAAAGCATGAAAAACCCCATATTCCAAGTGGCCTTCCTTCCTCAGTTGAGAACATCCTCAGTGGATGTTTTGAGTATGATTTGAGGAATCGCCCTTTAATGGTAGATATTGTGAGCGTCTTTAAAAGCTCACTGAATGAACTAGCCAATGATGGAGGATGGAGATATCTAGGAAATGTGAAAGTTGCTGCAAAATCAGGTAGCACTGGCTACACAGAGTGGTTCCTCTCAAAGGATCATCTTCAGGTGGGTGACAAGGTCCGATCTAGAAAGCCTCCCAATTCATGCAAACCCCAAAACATGGATGTCTCGGAAGGAACTGTTGTTGGTTTAGACCGAAATGCGGATCATGGATTTGTTCTTGTGAGGGTCCATGGTATTCATGACCCTATAAGAATTCATGTGTCAACCCTTGAACGAGTCACATTTGGCCTGGCAGCTGGTGATTGGGTACGCTTGAGGGATGAAAATGAGAAGCACTCACCAGTGGGCATCCTACATTCCATCAACCGTGATGGTAGAGTGGCTGTTGGTTTTATTGGTCTGCAAACTCTTTGGAATGGAAATTCTTCAGAACTTGAAATGGCAGAATCTTACTGTGTGGGCCAGTTTGTTAGGCTGAAAGGCAATGTTTTAAGTCCTCGATTCGAATGGCGTCGTAAAAGGGGAGGGTCCTGGGCTACTGGTAGGATTTCATGGATCCTACCAAATGGGTGTTTGGTTGTCAAGTTCCCAGGTATGCTGACTTTGGGGAATGAATCGAGTACCTTCTTGGCTGATCCCTCTGAGGTTGAAGTGGTTGATTTTAAGACTTGTCCTGGGATGATAGAGAAGTATCAACATATAGAGGATCATCATTGGGCAGTTAGACCAGTTCTAATTGCATTCGGCCTATTTACAGCTTTCAAACTAGGCATGTTAGTTGGAAAAAAAGTGAGGAGGAACAAGAAGGTTAATGCAATAGAAAGCGAAAGCCAATATCTTGATGGTCAAAATGCCAGCAGCCCTACACGGAGATCTTCTGTTGCTATAAATCCTGTCAACCCAACATGGGTTCCTTCAGTTGCTAATATCCTTTTCAAAGAAGGTGTCAACACTTCCACTGGTCGGTAG 1917 0.4304 MSKEVTATPSAASLGYVFLDDDPGILGTVKASSNRTNPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLYPIREDHMKIVLEKFNELYIKCQEVASVCWLHGISILNGRICIIMNLYEGSIGDKMARLREGRISLHDVLRYGINLAQGILELHSKGVIILNLKPFNVLLNDNDQAILGDVGIPSLLLGSSFLNLDMAQRLGTPNYMAPEQWEPEVRGPISFETDSWGFGCTIVEMLTGNQPWYGCPVGGIYQSVVEKHEKPHIPSGLPSSVENILSGCFEYDLRNRPLMVDIVSVFKSSLNELANDGGWRYLGNVKVAAKSGSTGYTEWFLSKDHLQVGDKVRSRKPPNSCKPQNMDVSEGTVVGLDRNADHGFVLVRVHGIHDPIRIHVSTLERVTFGLAAGDWVRLRDENEKHSPVGILHSINRDGRVAVGFIGLQTLWNGNSSELEMAESYCVGQFVRLKGNVLSPRFEWRRKRGGSWATGRISWILPNGCLVVKFPGMLTLGNESSTFLADPSEVEVVDFKTCPGMIEKYQHIEDHHWAVRPVLIAFGLFTAFKLGMLVGKKVRRNKKVNAIESESQYLDGQNASSPTRRSSVAINPVNPTWVPSVANILFKEGVNTSTGR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3615g00043 638 Gene3D Transferase(Phosphotransferase) domain 1 131 323 - -
Gabi3615g00043 638 CDD STKc_PknB_like 46 300 - -
Gabi3615g00043 638 SUPERFAMILY Protein kinase-like (PK-like) 42 307 IPR011009 -
Gabi3615g00043 638 Gene3D Phosphorylase Kinase; domain 1 27 129 - -
Gabi3615g00043 638 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3615g00043 638 PANTHER OS06G0639500 PROTEIN 1 635 - -
Gabi3615g00043 638 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3615g00043 Gabi-Chr3615 341400 346904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3615g00043 1 316 MAP Kinase Kinase Kinase AT2G17700 24.085 1.34e-19 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Gabi3615g00043 PK_Tyr_Ser-Thr 2.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3615g00043 - - gsj:114393396 1092.41