Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3615g00034 ATGGCGGTGAAACCTACAAAGGCTGAGAAGAAGATCGCTTACGATTCGAAGCTATGCCAGCTTCTGGATATGTATTCACAGATCCTGGTCGTGAACGCCGACAACGTCGGATCCAACCAGCTACAGAGCATTCGACATGGATTACGTGGCGACTCGGTGGTTCTCATGGGTAAAAACACGATGATGAAGCGCTCTTTTCGGATTCACTCTGAAAAAACAGGAAACAACGCATTTCTCAACCTGATTCCCCTTCTTGTCGGCAACGTGGGATTGATTTTCACAAAAGGTGACATGAGGGAGGTTAGCGAACAGATTGCCAAGCACAAGGTTGTTCATCCTATTCTCATGTGCACCAAGTTCTTGTCGTATGACACATACCACAATTGTTCCTTTTTGCAATCAGGACAATTACCTTTGGGCCTCACGTGTTGTAAGCAGCAGTCTTCTCAGGCTTCTGAGCCTTTTCTTGTATCCTCAAAATTCTTGCCGCACAAACATTGTTACTTGATGAGATCAAGACAGTTCTTGTTGACTAGTTTATGGGCTCCTTTTCTCCTTTTGGCTGGTAATTTGTGA 576 0.4497 MAVKPTKAEKKIAYDSKLCQLLDMYSQILVVNADNVGSNQLQSIRHGLRGDSVVLMGKNTMMKRSFRIHSEKTGNNAFLNLIPLLVGNVGLIFTKGDMREVSEQIAKHKVVHPILMCTKFLSYDTYHNCSFLQSGQLPLGLTCCKQQSSQASEPFLVSSKFLPHKHCYLMRSRQFLLTSLWAPFLLLAGNL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3615g00034 191 SUPERFAMILY Ribosomal protein L10-like 8 108 IPR043141 -
Gabi3615g00034 191 Gene3D - 5 130 IPR043141 -
Gabi3615g00034 191 Pfam Ribosomal protein L10 7 107 IPR001790 -
Gabi3615g00034 191 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3615g00034 Gabi-Chr3615 276528 279313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3615g00034 1 113 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 80.531 1.04e-60 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3615g00034 K02941 - aew:130763273 192.2