Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3615g00033 ATGGCGGTGAAACCTACAAAGGCTGAGAAGAAGATCGCTTACGATTCGAAGTTATGCCAGCTTCTGGATATGTATTCACAGATCCTGGTCGTGAACGCCGACAACGTCGGATCCAACCAGCTCCAGAGCATTCGACATGGATTACGTGGCGACTCTGTTGTTCTCATGGGTAAAAACACGATGATGAAGCGCTCTGTTCGGATTCACTCTGAAAAAACAGGAAACAACGCATTCCTCAACCTGATTCCCCTTCTTGTCGGCAACGTGGGATTGATTTTCACAAAAGGTGACCTGAAGGAGGTTAGCGAAGAGGTTGCCAAGTACAAGGTGGGAGCTCCTGCCCGTGTTGGTCTGGTTGCTCCAATTGATGTTGTTGTTCCTCCTGGCAACACAGGGCTTGATCCCTCGCAGACCTCTTTCTTCCAGGTGCTCAATATTCCAACAAAGATTAACAAGGGTACTGTCGAAATCATTACCCCTGTTGAACTGATTAAGAAAGGAGACAAGGTCGGCTCTTCTGAAGCTGCATTGCTTGCCAAACTCGGCATCAGGCCTTTCTCATATGGGCTTGTTGTACTATCCGTGTATGATAATGGTTCAGTCTTTAGCCCTGAGGTCCTCGACCTTACTGAGGATGACCTCACGGAGAAGTTTGCTATTGGTGTCTCAATGGTTACATCTTTGTCATTGGCCGTTGGATACCCAACTCTTGCAGCTGCACCACACATGTTTGTGAATGCCTACAAGAACGTTCTTGCTGTTGCAGTTGCGACAGAATATTCTTTCCCCCAGGCAGACGAGGTTAAGGAGTTCTTAAAGGACCCAAGTAAATTTGCTGTAGCTGCTGTTGCAGCACCTGCTGCAGCTTCTGGTGGTGCCCCAGCTGCTGCTGCTGCTGCCAAGGAAGAGGAAAAGAATGACGAGCCAGCTGAAGAATCTGATGATGACATGGGTTTTGGCTTGTTTGACTAG 972 0.4825 MAVKPTKAEKKIAYDSKLCQLLDMYSQILVVNADNVGSNQLQSIRHGLRGDSVVLMGKNTMMKRSVRIHSEKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLTEKFAIGVSMVTSLSLAVGYPTLAAAPHMFVNAYKNVLAVAVATEYSFPQADEVKEFLKDPSKFAVAAVAAPAAASGGAPAAAAAAKEEEKNDEPAEESDDDMGFGLFD 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3615g00033 323 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Gabi3615g00033 323 CDD Ribosomal_P0_L10e 9 185 - -
Gabi3615g00033 323 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 305 - -
Gabi3615g00033 323 PIRSF L10E 1 323 IPR030670 GO:0042254
Gabi3615g00033 323 FunFam 60S acidic ribosomal protein P0 113 186 - -
Gabi3615g00033 323 MobiDBLite consensus disorder prediction 307 323 - -
Gabi3615g00033 323 MobiDBLite consensus disorder prediction 294 323 - -
Gabi3615g00033 323 Gene3D - 6 209 IPR043141 -
Gabi3615g00033 323 Gene3D - 114 185 IPR043164 -
Gabi3615g00033 323 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Gabi3615g00033 323 Pfam 60s Acidic ribosomal protein 234 322 - -
Gabi3615g00033 323 Pfam Ribosomal protein L10 7 108 IPR001790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3615g00033 Gabi-Chr3615 272703 275202 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3615g00033 1 322 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 83.851 0.0 519