Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3615g00032 ATGGCGGTGAAACCTACAAAGGCTGAGAAGAAGATCGCTTACGATTCGAAGTTATGCCAGCTTCTGGATATGTATTCACAGATCCTGGTCCGCTCTGTTCGGATTCACTCTGAAAAAACAGGAAACAACGCATTCCTCAACCTGATTCCCCTTCTTGTCGGCAACGTGGGATTGATTTTCACAAAAGGTGACCTGAAGGAGGTTAGCGAAGAGGTTGCCAAGTACAAGGTGGGAGCTCCTGCCCGTGTTGGTCTGGTTGCTCCAATTGATGTTGTTGTTCCTCCTGGCAACACAGGGCTTGATCCCTCGCAGACCTCTTTCTTCCAGGTGCTCAATATTCCAACAAAGATTAACAAGGGTACTGTCGAAATCATTACCCCTGTTGAACTGATTAAGAAAGGAGACAAGGTCGGCTCTTCTGAAGCTGCATTGCTTGCCAAACTCGGCATCAGGCCTTTCTCATATGGGCTTGTTGTACTATCCGTGTATGATAATGGTTCAGTCTTTAGCCCTGAGGTCCTCGACCTTACTGAGGATGACCTCACGGAGAAGTTTGCTATTGGTGTCTCAATGGTTACATCTTTGTCATTGGCCGTTGGATACCCAACTCTTGCAGCTGCACCACACATGTTTGTGAATGCCTACAAGAACGTTCTTGCTGTTGCAGTTGCGACAGAATATTCTTTCCCCCAGGCAGACGAGGTTAAGGAGTTCTTAAAGGACCCAAGTAAATTTGCTGTAGCTGCTGTTGCAGCACCTGCTGCAGCTTCTGGTGGTGCCCCAGCTGCTGCTGCTGCTGCCAAGGAAGAGGAAAAGAATGACGAGCCAGCTGAAGAATCTGATGATGACATGGGTTTTGGCTTGTTTGACTAG 873 0.48 MAVKPTKAEKKIAYDSKLCQLLDMYSQILVRSVRIHSEKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLTEKFAIGVSMVTSLSLAVGYPTLAAAPHMFVNAYKNVLAVAVATEYSFPQADEVKEFLKDPSKFAVAAVAAPAAASGGAPAAAAAAKEEEKNDEPAEESDDDMGFGLFD 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3615g00032 290 MobiDBLite consensus disorder prediction 274 290 - -
Gabi3615g00032 290 MobiDBLite consensus disorder prediction 261 290 - -
Gabi3615g00032 290 PIRSF L10E 1 39 IPR030670 GO:0042254
Gabi3615g00032 290 PIRSF L10E 30 290 IPR030670 GO:0042254
Gabi3615g00032 290 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 29 272 - -
Gabi3615g00032 290 FunFam 60S acidic ribosomal protein P0 80 153 - -
Gabi3615g00032 290 Pfam Insertion domain in 60S ribosomal protein L10P 81 150 IPR040637 -
Gabi3615g00032 290 Gene3D - 28 176 IPR043141 -
Gabi3615g00032 290 Pfam 60s Acidic ribosomal protein 201 289 - -
Gabi3615g00032 290 Gene3D - 81 152 IPR043164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3615g00032 Gabi-Chr3615 272703 275204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3615g00032 1 289 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 74.845 3.71e-159 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3615g00032 K02941 - vvi:100250067 460.685