Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3615g00012 ATGGATCGCCGTTTGGAGTCTATGGAAATCTCCCAAAATCAACGATTGGATGACATACGTCAAGAGTTCCGTCAACAGAATAAAGAAATTCTCGCTGTTTTGTCTATGAATCAAGGTCATCCTTCCAACACCACTAATGATCCTAATGCTGGGATTTTGGGGTCAGCAGGCCCTGCGCGGAATCTGCGTCTCACAAATTTAGATCATCCCAGATCCCGATCAGTAAAATTGGAATTCCCCAGATTTGGATCGGGAGATCCTTTAGATTGGATTTATGCAGCGGAACGTTACTTCCAATATTTTCACATTCCTGATTCTGAACGACTTCTATTGGTTTCGTTTAATTTGGACTCTCCTGCATCATGTTGGTTCCGGAGTCAATACCAGGCGGGTCCATACCCGGATTGGACTACGTTTGTTGCTGCACTTCAACAGCGTTTTCGTCCATCGGAGTTTGAGGACTCAGCTTCTGCTCTTTTCAAACCACAGCAAACAGAAGAAAACATTCTCTCCCCGAGTCTTCAGCTGATGCATGGGTCCCACCTTAAGGCGCTGATTGAGGGCACCACAGACACAGAGACCTGGACCTACGCTATCCTCTGGCGCTCTTCCTCCTCCTCCTCCTCTAACCGCTCCCTCTTGAATTTCGACCATGGCCACTACAACCCCAAAGCGTCGTCGTGTAAGTGCCTCCCTAAGCAGGTTAGCATTTTCGGGTCGCCTGTCACCGTCACGGTCACGGACGAAGGAGTGGTCAGCGACGAGGAGTGGTTCTTTAAGATATCGATGGATCAGTCCTTCGCCGACACAGAGGACTTGCCCGGACACGCTTTCTTCAATTCGAGTCCCGTTTGGGTAACCGGCACAGATCAGTTATTGGCTTCCACGTGGCAGAGGACCAAGTGGGGCCACAGCTTTGGGATTCGAACCTTCGTTGTCATACCCTCCGAGAATGGGGTGCTGGAGCTGGGCTCCACCGAGCTCATACTCTGCAACACTGCGCGGCTGGACGCGATGTTCGGTTTCCTCGTTCGGACTCGGTTACTTGGCCACCTTCCCCTACAACATCTTCGTGAACAAATCCGCTTGCAGTCTTCGAACGTTGAAAGCTGGCTTGAAAAAATAGATAATGAGATAGAGAATTGCGAGCAAGACACCTCATATAAGCCATTCCCAGGCAAAGAGAAGATCAATGATTTAAAATGTCCATGGCCACTATTGACAGACAATTCTGACAAAAGCACCGATAGAACTTCGTATTCATGTTCACACGATTATTCTGGCCCGTCCAGAATTTTTAGTATATAG 1308 0.487 MDRRLESMEISQNQRLDDIRQEFRQQNKEILAVLSMNQGHPSNTTNDPNAGILGSAGPARNLRLTNLDHPRSRSVKLEFPRFGSGDPLDWIYAAERYFQYFHIPDSERLLLVSFNLDSPASCWFRSQYQAGPYPDWTTFVAALQQRFRPSEFEDSASALFKPQQTEENILSPSLQLMHGSHLKALIEGTTDTETWTYAILWRSSSSSSSNRSLLNFDHGHYNPKASSCKCLPKQVSIFGSPVTVTVTDEGVVSDEEWFFKISMDQSFADTEDLPGHAFFNSSPVWVTGTDQLLASTWQRTKWGHSFGIRTFVVIPSENGVLELGSTELILCNTARLDAMFGFLVRTRLLGHLPLQHLREQIRLQSSNVESWLEKIDNEIENCEQDTSYKPFPGKEKINDLKCPWPLLTDNSDKSTDRTSYSCSHDYSGPSRIFSI 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3615g00012 435 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 181 333 IPR025610 -
Gabi3615g00012 435 PANTHER MYC 180 334 IPR045084 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3615g00012 Gabi-Chr3615 101422 103951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3615g00012 181 342 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 39.791 3.33e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3615g00012 K13422 - ccaj:109811084 158.688