Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3615g00010 ATGACAGAAGACAACACTCTCTCCCTGACCCTGAGTCTTCAGCTGTTGCATGGGTCCCACCTTAAGGCGCTGATTGAGGACACCACAGACACACAGACCTGGACCTACGCTATCCTCTGGCGCTCCTCCTCTAACAGCTCCCTCTTGAATTTCCACGATGGCCACTACAACCCCAAAGCGTCGTCGTTTAAGCAGCTTCGCATTTTCGGGTCGTCTGTCACGGTCACGGTCAGCGACGAGGAGTGGTTCTTTAAGATATCGATGAGTCAATCCTTCACCGACACAGAGGACTTGCCCGGACACGCTTTCTTCAATTCGAGTCCCGTTTGGGTAACAGGCACAGATCAGTTATTGGGTTCCACGTGGCAGAGGACCAAGAGGGCCCACCACTTTGGGATTCGAACCTTCGTTGCCATACCCTCCGAGAATGGGGTTCTGGAGCTGGGCTCCACCGAGCTCATATTCTTCAACACTGCACGGCTGAACACGTTGTTCGGTTTCCTCGTTCGGACTCGGTTACTTGGCCACATTCCCCTACATCGTCTTCGGGAACAAATCCGGTAA 564 0.5355 MTEDNTLSLTLSLQLLHGSHLKALIEDTTDTQTWTYAILWRSSSNSSLLNFHDGHYNPKASSFKQLRIFGSSVTVTVSDEEWFFKISMSQSFTDTEDLPGHAFFNSSPVWVTGTDQLLGSTWQRTKRAHHFGIRTFVAIPSENGVLELGSTELIFFNTARLNTLFGFLVRTRLLGHIPLHRLREQIR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3615g00010 187 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 21 157 IPR025610 -
Gabi3615g00010 187 PANTHER MYC 20 159 IPR045084 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3615g00010 Gabi-Chr3615 66404 66967 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3615g00010 21 167 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 32.979 3.16e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3615g00010 K13422 - gmx:100790168 120.168