Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3615g00005 ATGTACAGGAGAAAGGGGAGTCAGTCAAAATTCTGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCACATTGTAAAAGGCTCCATTGTGCGGGATACAGGGCTGATGGTCACGACTGCTTTTCTTGTGATATAGTTTTAAGGGTGGTGATTTTGTCAATCGAAATGTTGTCCGAGTTGCAAGCCTTGTTCCATTTTCATGTTTCGTGTGACAATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAGTCACCTAGGCTGAAGCATGATGCTCCAGGCCTTCTATCCATGGCAATTACTGATCGTGACACTCTTGGTTCTCATTTTATCATCACTTTGAAAGCTGATCACCATCTTGATAGGAAGCATGTAGTCTTTGGCAAGCTTGTGCAAGGTCATAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGACATCCAACTGTAACTGTGAAAATAATTAATTGTGGTGAATATAATGAGGATGGAAAGAAGATAAATAAATTAAAACTAGGAAGGGATGGATCTTCTGAAGCCCATAATCATGAAGCACGACAGAAGGTGAAGCACAAAAAATCTTCAGGAGACAGAAGGAAAAGGAGAAAATACTACTCATCAGAATCGAATAGTACTTCAGATTCAGACATGGAATCTTCAAAAAGTGATAGTGATTCTGACTCGGATGTGTCTTCATCATCTTATACCAGTTCCTCCAGCGACGGCAGGCAGAGGAAGAGAAAGAGGTCCAGGAAAGATAAACATCGACAAGGAAAAAGAAGAGATAAACACCGAGACAAGAGACGAAGGAAACGAGATAAAAGATCAAAGCATAGATCAAGAAGGGAATCGAGCAGTCTTACTGATTCAGATAGTGAAAGTAAGAGTGACAATAGCTCTGATAGCAAAAGTCTTGATGCTCAAGGGAGAAATCAGAAGCATAAAGATCATTCTCAGAGAAATGCAGCTGAAGTTCAGTCTCCCTTAGTTGTAGAGAAAGAATTACCTCCCATGCATCTTAAAAAGAGGGAGGAAGTGGGTATGCTAGAGGAGGAATTCTCAAAGGAAAATGGAGAGCAGCATAGAAATGGCATTGGGGCCAACCACAGATCTGACAGAGGTGAAGAGAGGCAGCCTGACGTGATGGATGATCATCCAGGCAAATCTAGGAGCCGAAGCATGAGTCCTAAGCAAACCATGAGTAAGAATATATGTACTAGTCCAAAGAGTGAGAGCAAAAGCCCAAGCGTTAGTCCAAAAAGGAGATTGAGCAGAAGTCCTGTTAGAAGCATTAGCAGGAGTCCAAACAGCAGAAGCCCAGTGAGGGGCCGGAAGGAGAGAAGTATCAGTAGGAGCCCTGTTAGAACTCGTGATCATGAAAGTGTAAGTAGAAGCCCCGTTAGATCTCGCGATCGTAGAAATTTCCGCGAGAGCCCTGTAAGATCCCTTTCTCGGAGTCGCCGGAGCTGGAATTCTCCCAAAGCATCATCACGAAGAACGGTCAGCAGAAGCCCTGTAGGAGTGTCAAGAAAGAGCCTAAGCAGGAGTCCAATTAGATCATCTGCCAGAAGCTTAAGCAGAAGCTCCGGCAGGGTCCCTTTGAGAAGCATTAGCCAAAGTCCAGTTAGAGTGCTTAGCAGAGGCAATCGCCAGAGTTATTCTAGGAGTCGTAGCCCTGTCCGTCGGGAAAGGACACCTCATGGGAGAAGTTTGTCAAGGAGCGTGTCTCCTGATGCTTCACCAAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGAACGCCCTCTCGGTCTCCCGCGAGGTCATACCGCTATAATGGAAGAAGTGACCGCTATAATGGAAGAAGTGACCGTGACAGATATTCAGGTTACAGAAGGTACTCCCCTAGGCGTTATAGGGGCCCACAGCCACGTGGAAGAACTCCACCAAGGTACCGAACCAGGAGGAGCAGGACGCCATCTGTATCACGTAGCCCACGTTACCGAGCTCGACGATATAGCCGAAGCCGTAGCCCAGTTCGTAGTCATTCACCGGTTGATCCTCGTTCTCGGGCCTCTCCTCGTGCAGAGAGGCACATAGCATCATCCCAGAGCAGGAGTCCATCACGATCCAGGTCTTCAGTGGAATCACAATCTCCACGAAAAGCAAGCAGAGGCAACATGTCAAGGTCATCGTCTGGAAGCCCAGCTGGAAAGAAAGGCCTAGTCTCTTATGGAGATGGTTCTCCCGACTCAAGCCAAAGGTGA 2289 0.46 MYRRKGSQSKFWKITALQGFFLPSHCKRLHCAGYRADGHDCFSCDIVLRVVILSIEMLSELQALFHFHVSCDNGTGGESIYGSKFPDESPRLKHDAPGLLSMAITDRDTLGSHFIITLKADHHLDRKHVVFGKLVQGHNILKKIEDVGDEEGHPTVTVKIINCGEYNEDGKKINKLKLGRDGSSEAHNHEARQKVKHKKSSGDRRKRRKYYSSESNSTSDSDMESSKSDSDSDSDVSSSSYTSSSSDGRQRKRKRSRKDKHRQGKRRDKHRDKRRRKRDKRSKHRSRRESSSLTDSDSESKSDNSSDSKSLDAQGRNQKHKDHSQRNAAEVQSPLVVEKELPPMHLKKREEVGMLEEEFSKENGEQHRNGIGANHRSDRGEERQPDVMDDHPGKSRSRSMSPKQTMSKNICTSPKSESKSPSVSPKRRLSRSPVRSISRSPNSRSPVRGRKERSISRSPVRTRDHESVSRSPVRSRDRRNFRESPVRSLSRSRRSWNSPKASSRRTVSRSPVGVSRKSLSRSPIRSSARSLSRSSGRVPLRSISQSPVRVLSRGNRQSYSRSRSPVRRERTPHGRSLSRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPARSYRYNGRSDRYNGRSDRDRYSGYRRYSPRRYRGPQPRGRTPPRYRTRRSRTPSVSRSPRYRARRYSRSRSPVRSHSPVDPRSRASPRAERHIASSQSRSPSRSRSSVESQSPRKASRGNMSRSSSGSPAGKKGLVSYGDGSPDSSQR 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3615g00005 762 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 31 165 IPR002130 GO:0000413|GO:0003755
Gabi3615g00005 762 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 72 165 - -
Gabi3615g00005 762 MobiDBLite consensus disorder prediction 689 703 - -
Gabi3615g00005 762 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 76 164 IPR002130 GO:0000413|GO:0003755
Gabi3615g00005 762 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Gabi3615g00005 762 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Gabi3615g00005 762 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Gabi3615g00005 762 MobiDBLite consensus disorder prediction 180 762 - -
Gabi3615g00005 762 SUPERFAMILY Cyclophilin-like 70 168 IPR029000 -
Gabi3615g00005 762 MobiDBLite consensus disorder prediction 622 640 - -
Gabi3615g00005 762 MobiDBLite consensus disorder prediction 445 489 - -
Gabi3615g00005 762 MobiDBLite consensus disorder prediction 341 397 - -
Gabi3615g00005 762 MobiDBLite consensus disorder prediction 585 605 - -
Gabi3615g00005 762 MobiDBLite consensus disorder prediction 313 327 - -
Gabi3615g00005 762 MobiDBLite consensus disorder prediction 192 206 - -
Gabi3615g00005 762 Gene3D - 63 167 IPR029000 -
Gabi3615g00005 762 MobiDBLite consensus disorder prediction 286 306 - -
Gabi3615g00005 762 MobiDBLite consensus disorder prediction 232 246 - -
Gabi3615g00005 762 MobiDBLite consensus disorder prediction 250 285 - -
Gabi3615g00005 762 MobiDBLite consensus disorder prediction 704 745 - -
Gabi3615g00005 762 MobiDBLite consensus disorder prediction 490 561 - -
Gabi3615g00005 762 MobiDBLite consensus disorder prediction 398 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3615g00005 Gabi-Chr3615 19311 25758 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3615g00005 74 161 U-box Gene Family AT5G67530 43.333 1.48e-11 65.9