Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3615g00004 ATGGCAAAGAAGAAAAATCCCCTGGTGTTTATGGATGTGTCCATAGATGGGGATCCTGTTGAAAGGATGGTTTTTGAGCTCTTTTATGATGTAGCTCCGAAGACTGCTGAGAATTTTCGTGCACTATGTACAGGAGAAAGGGGAGTCAGTCAAAATTCTGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCACATTGTAAAAGGCTCCATTGTGCGGGGTGGTGATTTTGTCAATCGAAATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAGTCACCTAGGCTGAAGCATGATGCTCCAGGCCTTCTATCCATGGCAATTACTGATCGTGACACTCTTGGTTCTCATTTTATCATCACTTTGAAAGCTGATCACCATCTTGATAGGAAGCATGTAGTCTTTGGCAAGCTTGTGCAAGGTCATAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGACATCCAACTGTAACTGTGAAAATAATTAATTGTGGTGAATATAATGAGGATGGAAAGAAGATAAATAAATTAAAACTAGGAAGGGATGGATCTTCTGAAGCCCATAATCATGAAGCACGACAGAAGGTGAAGCACAAAAAATCTTCAGGAGACAGAAGGAAAAGGAGAAAATACTACTCATCAGAATCGAATAGTACTTCAGATTCAGACATGGAATCTTCAAAAAGTGATAGTGATTCTGACTCGGATGTGTCTTCATCATCTTATACCAGTTCCTCCAGCGACGGCAGGCAGAGGAAGAGAAAGAGGTCCAGGAAAGATAAACATCGACAAGGAAAAAGAAGAGATAAACACCGAGACAAGAGACGAAGGAAACGAGATAAAAGATCAAAGCATAGATCAAGAAGGGAATCGAGCAGTCTTACTGATTCAGATAGTGAAAGTAAGAGTGACAATAGCTCTGATAGCAAAAGTCTTGATGCTCAAGGGAGAAATCAGAAGCATAAAGATCATTCTCAGAGAAATGCTGAAGTTCAGTCTCCCTTAGTTGTAGAGAAAGAATTACCTCCCATGCATCTTAAAAAGAGGGAGGAAGTGGGTATGCTAGAGGAGGAATTCTCAAAGGAAAATGGAGAGCAGCATAGAAATGGCATTGGGGCCAACCACAGATCTGACAGAGGTGAAGAGAGGCAGCCTGACGTGATGGATGATCATCCAGGCAAATCTAGGAGCCGAAGCATGAGTCCTAAGCAAACCATGAGTAAGAATATATGTACTAGTCCAAAGAGTGAGAGCAAAAGCCCAAGCGTTAGTCCAAAAAGGAGATTGAGCAGAAGTCCTGTTAGAAGCATTAGCAGGAGTCCAAACAGCAGAAGCCCAGTGAGGGGCCGGAAGGAGAGAAGTATCAGTAGGAGCCCTGTTAGAACTCGTGATCATGAAAGTGTAAGTAGAAGCCCCGTTAGATCTCGCGATCGTAGAAATTTCCGCGAGAGCCCTGTAAGATCCCTTTCTCGGAGTCGCCGGAGCTGGAATTCTCCCAAAGCATCATCACGAAGAACGGTCAGCAGAAGCCCTGTAGGAGTGTCAAGAAAGAGCCTAAGCAGGAGTCCAATTAGATCATCTGCCAGAAGCTTAAGCAGAAGCTCCGGCAGGGTCCCTTTGAGAAGCATTAGCCAAAGTCCAGTTAGAGTGCTTAGCAGAGGCAATCGCCAGAGTTATTCTAGGAGTCGTAGCCCTGTCCGTCGGGAAAGGACACCTCATGGGAGAAGTTTGTCAAGGAGCGTGTCTCCTGATGCTTCACCAAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGAACGCCCTCTCGGTCTCCCGCGAGGTCATACCGCTATAATGGAAGAAGTGACCGCTATAATGGAAGAAGTGACCGTGACAGATATTCAGGTTACAGAAGGTACTCCCCTAGGCGTTATAGGGGCCCACAGCCACGTGGAAGAACTCCACCAAGGTACCGAACCAGGAGGAGCAGGACGCCATCTGTATCACGTAGCCCACGTTACCGAGCTCGACGATATAGCCGAAGCCGTAGCCCAGTTCGTAGTCATTCACCGGTTGATCCTCGTTCTCGGGCCTCTCCTCGTGCAGAGAGGCACATAGCATCATCCCAGAGCAGGAGTCCATCACGATCCAGGTCTTCAGTGGAATCACAATCTCCACGAAAAGCAAGCAGAGGCAACATGTCAAGGTCATCGTCTGGAAGCCCAGCTGGAAAGAAAGGCCTAGTCTCTTATGGAGATGGTTCTCCCGACTCAAGCCAAAGGTGA 2313 0.4596 MAKKKNPLVFMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGERGVSQNSGKSLHYKGSFFHHIVKGSIVRGGDFVNRNGTGGESIYGSKFPDESPRLKHDAPGLLSMAITDRDTLGSHFIITLKADHHLDRKHVVFGKLVQGHNILKKIEDVGDEEGHPTVTVKIINCGEYNEDGKKINKLKLGRDGSSEAHNHEARQKVKHKKSSGDRRKRRKYYSSESNSTSDSDMESSKSDSDSDSDVSSSSYTSSSSDGRQRKRKRSRKDKHRQGKRRDKHRDKRRRKRDKRSKHRSRRESSSLTDSDSESKSDNSSDSKSLDAQGRNQKHKDHSQRNAEVQSPLVVEKELPPMHLKKREEVGMLEEEFSKENGEQHRNGIGANHRSDRGEERQPDVMDDHPGKSRSRSMSPKQTMSKNICTSPKSESKSPSVSPKRRLSRSPVRSISRSPNSRSPVRGRKERSISRSPVRTRDHESVSRSPVRSRDRRNFRESPVRSLSRSRRSWNSPKASSRRTVSRSPVGVSRKSLSRSPIRSSARSLSRSSGRVPLRSISQSPVRVLSRGNRQSYSRSRSPVRRERTPHGRSLSRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPARSYRYNGRSDRYNGRSDRDRYSGYRRYSPRRYRGPQPRGRTPPRYRTRRSRTPSVSRSPRYRARRYSRSRSPVRSHSPVDPRSRASPRAERHIASSQSRSPSRSRSSVESQSPRKASRGNMSRSSSGSPAGKKGLVSYGDGSPDSSQR 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3615g00004 770 MobiDBLite consensus disorder prediction 697 711 - -
Gabi3615g00004 770 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Gabi3615g00004 770 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Gabi3615g00004 770 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Gabi3615g00004 770 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Gabi3615g00004 770 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Gabi3615g00004 770 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Gabi3615g00004 770 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Gabi3615g00004 770 MobiDBLite consensus disorder prediction 201 215 - -
Gabi3615g00004 770 MobiDBLite consensus disorder prediction 630 648 - -
Gabi3615g00004 770 MobiDBLite consensus disorder prediction 241 255 - -
Gabi3615g00004 770 MobiDBLite consensus disorder prediction 295 315 - -
Gabi3615g00004 770 MobiDBLite consensus disorder prediction 453 497 - -
Gabi3615g00004 770 MobiDBLite consensus disorder prediction 349 405 - -
Gabi3615g00004 770 MobiDBLite consensus disorder prediction 259 294 - -
Gabi3615g00004 770 MobiDBLite consensus disorder prediction 593 613 - -
Gabi3615g00004 770 Gene3D - 1 175 IPR029000 -
Gabi3615g00004 770 MobiDBLite consensus disorder prediction 712 753 - -
Gabi3615g00004 770 MobiDBLite consensus disorder prediction 322 336 - -
Gabi3615g00004 770 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Gabi3615g00004 770 SUPERFAMILY Cyclophilin-like 4 177 IPR029000 -
Gabi3615g00004 770 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Gabi3615g00004 770 MobiDBLite consensus disorder prediction 498 569 - -
Gabi3615g00004 770 MobiDBLite consensus disorder prediction 406 452 - -
Gabi3615g00004 770 MobiDBLite consensus disorder prediction 189 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3615g00004 Gabi-Chr3615 19257 25758 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3615g00004 25 170 U-box Gene Family AT5G67530 39.865 1.87e-20 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3615g00004 K09566 - cave:132189182 653.284