Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3609g00017 ATGTCTGTAAATGAAGATGCTGAACAGGAATGCGAACCACAAAAGAAGAAGCCACCTTCTGAGGATGAGAAGAGGAAGAAGAAAATTGTTCCTGGGAGTTTGATGAAAGCTTTGATGAGGCCTGGTGGGGGTGATTCTGGACCTTCAGATGGTGACCAGGTTATCTATCATTGCACAATTCGAACTTTGGATGGAGTACTTGTGGAATCTACTAGATCTGATTATGGAGGCAAGGGCACCCCTATAAGACATGTTTTGGGCAAAAGCAAGATATTACTAGGCTTGCTAGAAGGAATTCCAACAATGTTGAAGGGTGAAGTGGCAATGTTCAAGATGAAGCCTCAATTGCATTATGGTGAGGATGATTGTCCTATTTCTGCTCCCGATGGTTTTCCTAAGGATGATGAACTTCATTTTGAAATTGAGCTGATAGATTTTTTCAAAGCCAAGGTTGTTACTGATGATTTGGGAATAGTAAAAAAGGTAGTACGTGAAGGGAAGGGTTGGGAATCTCCAAGAGAACCTTACGAAGTGAAGGCTTGGATTTCAGCAAAGACAGTTATTGGGAAATTGATCATGTCACACACAGAAGGAGAACCATACTTCTTTACATTTGGAAAATCAGAGGTACCTAAAGGTCTTGAACTGGGAATAGGAACAATGGTTCGGGAAGAGAAGGCTGTAATATATGTTACTCGTCAATATTTAACTGAGTCTCCACTGATGCCTGTAATTGAAGATTATGACGAAATCCATTTTGAAGTGGAGCTCATACACTTTATTCAAGTGAGGGACATGCTTGGAGATGGGCGCCTAATAAAACGCCGGATTCGTGATGGGAAAGGTGAGTTTCCAATGGACTGCCCCCTTCATGACAGTTTACTCCGCGTTCATTACAAGGGCGCCATTCTCAATGAAGAAAAGAGGGTTTTCTATGATACAAGAGTTGATAATGATGGTCAGCCATTGGAGTTCTGTTCTGGAGAAGGGCTTGTACCAGAGGGATTTGAAATGTGTGTTCGTCTGATGCTTCCTGGAGAGATAGCTCTAGTCACATGTCCCCCTGACTATGCTTATGATAAGTTTCCAAGGCCCTTAAATGTCCCTGAGGGTGCTCACATTCAATGGGAAATTGAGCTTATAGCTTTTGAAATGCCAAAGGACTGGACTGGATTGGACTTTCAAAGTATAATGAATGAAGCCGAAAAGATCAGAAACACGGGTAACAGGCTGTTCAAAGAAGGAAAATATGAACTTGCCAAAGCAAAATATGAAAAGGTGCTTCGAGAATTTAATCATGTTAATCCACAAGATGATGAGGAAGGAAAAGTCTTTGTAGATACGCGTAATTTGCTACACCTGAATGTTGCTGCTTGCTATCTAAAGTTGGGAGAATGTAAAAAGTCCATTGAGACTTGCAATAAGGTTTTGGAAGCAAATCCTGCCAATGTCAAGGGTCTTTATCGTCGTGGAATGGCCTACATGGCTGCTGGAGATTTTGAAGAAGCAAGAGATGATTTCAAAATGATGATGAAAGTTGACAAGTCAACTGAATCAGATGCAACTGCAGCTCTTCTAAAACTGAAGCAGAAGGAGCAGGAAGTTGAGAAGAAAGCTCGGAAACAATTTAAAGGGTTATTTGACAAGAAGCCTGGAGAAATTGCAGAAGTTAAAGCTGATGAAGATGGGGATCAGATGACAGGTGAAAGCCAGAAGGAGGGTGAAGTACATGGGGACTCAGATGGAACAAACTCAGAGGATTCAGACGAAGCTGCACCCAATGCACGTCCAATGGGTTGGTTCTCTCTCTTTTGGCCTGCTGGTAGAAGACTTTTTTCATCTCTTGGGCTTCAAAGATGTGCCATACTATAA 1872 0.4188 MSVNEDAEQECEPQKKKPPSEDEKRKKKIVPGSLMKALMRPGGGDSGPSDGDQVIYHCTIRTLDGVLVESTRSDYGGKGTPIRHVLGKSKILLGLLEGIPTMLKGEVAMFKMKPQLHYGEDDCPISAPDGFPKDDELHFEIELIDFFKAKVVTDDLGIVKKVVREGKGWESPREPYEVKAWISAKTVIGKLIMSHTEGEPYFFTFGKSEVPKGLELGIGTMVREEKAVIYVTRQYLTESPLMPVIEDYDEIHFEVELIHFIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLRVHYKGAILNEEKRVFYDTRVDNDGQPLEFCSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFPRPLNVPEGAHIQWEIELIAFEMPKDWTGLDFQSIMNEAEKIRNTGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDEEGKVFVDTRNLLHLNVAACYLKLGECKKSIETCNKVLEANPANVKGLYRRGMAYMAAGDFEEARDDFKMMMKVDKSTESDATAALLKLKQKEQEVEKKARKQFKGLFDKKPGEIAEVKADEDGDQMTGESQKEGEVHGDSDGTNSEDSDEAAPNARPMGWFSLFWPAGRRLFSSLGLQRCAIL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3609g00017 623 Gene3D - 263 387 IPR046357 GO:0003755
Gabi3609g00017 623 Gene3D - 2 149 IPR046357 GO:0003755
Gabi3609g00017 623 MobiDBLite consensus disorder prediction 554 584 - -
Gabi3609g00017 623 FunFam Peptidylprolyl isomerase 262 386 - -
Gabi3609g00017 623 FunFam Peptidylprolyl isomerase 151 261 - -
Gabi3609g00017 623 SUPERFAMILY FKBP-like 152 260 - -
Gabi3609g00017 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 51 147 IPR001179 GO:0003755
Gabi3609g00017 623 SUPERFAMILY FKBP-like 21 150 - -
Gabi3609g00017 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 194 261 IPR001179 GO:0003755
Gabi3609g00017 623 SUPERFAMILY FKBP-like 247 383 - -
Gabi3609g00017 623 SMART tpr_5 450 483 IPR019734 GO:0005515
Gabi3609g00017 623 SMART tpr_5 401 434 IPR019734 GO:0005515
Gabi3609g00017 623 SMART tpr_5 484 517 IPR019734 GO:0005515
Gabi3609g00017 623 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515
Gabi3609g00017 623 FunFam Peptidylprolyl isomerase 8 150 - -
Gabi3609g00017 623 MobiDBLite consensus disorder prediction 554 596 - -
Gabi3609g00017 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 384 IPR001179 GO:0003755
Gabi3609g00017 623 SUPERFAMILY TPR-like 398 539 IPR011990 GO:0005515
Gabi3609g00017 623 ProSiteProfiles TPR repeat profile. 450 483 IPR019734 GO:0005515
Gabi3609g00017 623 MobiDBLite consensus disorder prediction 1 51 - -
Gabi3609g00017 623 Pfam Tetratricopeptide repeat 485 508 IPR019734 GO:0005515
Gabi3609g00017 623 Gene3D Tetratricopeptide repeat domain 395 549 IPR011990 GO:0005515
Gabi3609g00017 623 FunFam Peptidylprolyl isomerase 389 545 - -
Gabi3609g00017 623 MobiDBLite consensus disorder prediction 8 30 - -
Gabi3609g00017 623 Coils Coil 521 541 - -
Gabi3609g00017 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 48 144 IPR001179 GO:0003755
Gabi3609g00017 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 177 258 IPR001179 GO:0003755
Gabi3609g00017 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 293 381 IPR001179 GO:0003755
Gabi3609g00017 623 Gene3D - 150 262 IPR046357 GO:0003755
Gabi3609g00017 623 PANTHER INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 150 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3609g00017 Gabi-Chr3609 176159 190894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3609g00017 34 549 Calmodulin-binding Proteins AT5G48570 30.566 8.76e-64 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3609g00017 - - gmx:100818201 1134.01