Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3608g00035 ATGGCTCACCATTTTTCAAACCAGGCCTTAGGTTGCTTTCTCTTATTTTCTCTAGTTGTTCCTTCTCTTTCAACCTTTTTTCATGATCATTTTCATGGTAGATTTCCCATTTTTAAGCCAATAGAACCTATAACATTCCCAAAAGTTGGTGATGTTCCACCAGCTGAAGTTCATGAAAACAATTGTAATACAACATTTGCCAATGAAAGGCTAGAAAATGCCTATGTTGCTCTTCAAGCATGGAAAAAGGCTATTTACTCTGACCCTTTTAACACAACAGGTAACTGGGTTGGTTATGATGTTTGCTCCTACAATGGTCTGTTTTGTGCTCCTGCTCTTGATGATCCCACATTGAGTGTAGTTGCTGGTATTGATCTTAACAATGCAGACATTGCTGGGCACCTCCCAAAAGAGTTAAGCCTCTTGAAAGATATTGCACTTTTCCACATCAACTCAAATAGATTCTGTGGAATTGTCCCACAGAGCTTAGAGAATCTCGCTCATGTGTTTGAGTTTGACATCAGCAACAATCATTTTGTTGGTGGTTTTCCTTCTGTGGTCCTTACATGGCCAAGCTTGAAGTACTTGGATATCAGATACAATAAATTTGTAGGAGCTTTACCTCCACAGCTATTTGAGAAAGATCTTGATGCAATATTCTTGAACAACAACCATTTCACATCTATTATCCCAGAAACTCTAGGAAAATCAAAGGCCTCGGTTGTGAACTTTGCTAACAACAAATTCTCAGGTTGCATTCCAAAATCTATTGGGAACATGGTGAATTTGAATGAGATTGTCTTCATGGGCAATAGACTTGGAAGCTGCTTCCCACAAGAGCTTGGTTTGCTACAAAATGTGACTGTTTTGGATGTTAGCAGTAACGGTTTGGTAGGGACTCTACCTAACATGTCAGGATTGAAGAATGTGGAGGTCATAGATATTGCACACAACAAGCTTAGTGGATATGTGTCTAACACCATTTGTCAGCTACCTATGTTGAAGAACTTCACATTTTCTGACAACTACTTTAATGCGGAAGCTCAAAGTTGTATCCCTTCTTCCAATTCATTGGTTTGTTTTGATGACTCAAACAATTGTTTATCTGGAAGAAATAATCAAAAGACATCCATGCAATGCTTACCAGTGCTAACTCGCTCTGCGGACTGTAACAAGCACCATGGTGGAGGCAATGGGAATAGCCATGTCCCCTCAACACCAAAACCAACTCCATCCCCTAAGGATATCTCACGATCAAGTGCACCAGTGCCATCACCTCCTGTAACTTTTCAATCACCTCTTGCATCTGTCCACTCACCACCACCACCAGTTCATTCTCCTCCTCCACCAGTTCACTCTCCAACACCTCCACCTAACCATTCTCTGCCATAA 1392 0.4073 MAHHFSNQALGCFLLFSLVVPSLSTFFHDHFHGRFPIFKPIEPITFPKVGDVPPAEVHENNCNTTFANERLENAYVALQAWKKAIYSDPFNTTGNWVGYDVCSYNGLFCAPALDDPTLSVVAGIDLNNADIAGHLPKELSLLKDIALFHINSNRFCGIVPQSLENLAHVFEFDISNNHFVGGFPSVVLTWPSLKYLDIRYNKFVGALPPQLFEKDLDAIFLNNNHFTSIIPETLGKSKASVVNFANNKFSGCIPKSIGNMVNLNEIVFMGNRLGSCFPQELGLLQNVTVLDVSSNGLVGTLPNMSGLKNVEVIDIAHNKLSGYVSNTICQLPMLKNFTFSDNYFNAEAQSCIPSSNSLVCFDDSNNCLSGRNNQKTSMQCLPVLTRSADCNKHHGGGNGNSHVPSTPKPTPSPKDISRSSAPVPSPPVTFQSPLASVHSPPPPVHSPPPPVHSPTPPPNHSLP 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3608g00035 463 MobiDBLite consensus disorder prediction 412 435 - -
Gabi3608g00035 463 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 33 463 - -
Gabi3608g00035 463 MobiDBLite consensus disorder prediction 436 463 - -
Gabi3608g00035 463 FunFam Leucine-rich repeat extensin-like protein 1 75 236 - -
Gabi3608g00035 463 SUPERFAMILY L domain-like 74 370 - -
Gabi3608g00035 463 MobiDBLite consensus disorder prediction 391 463 - -
Gabi3608g00035 463 Gene3D Ribonuclease Inhibitor 240 390 IPR032675 -
Gabi3608g00035 463 Gene3D Ribonuclease Inhibitor 71 239 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3608g00035 Gabi-Chr3608 505582 507060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3608g00035 7 422 Trihelix Transcription Factor Family AT1G49490 56.120 3.82e-168 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3608g00035 - - aprc:113870095 610.142