Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3605g00045 ATGGCTCTACAACAATCAGAGCAAGATGTGCCAATGCAAGAATCAGAATCTACATTTTCTCAATTGAGCAAACAAAACTCAATACTTTCACTTACCCTTGATGAGTTCAAATGCAAGAGTGGAAAGAGTTTTGGGTCCATGAACATGGATGAATTCTTGTCAAGCATTTGGAACTCCGATGATAACCAAGTTAATCCACTACAAGCCCAAAATGAAACTCCTCAGAGTAGAAGTGTTGCTACAGAACCCACCATTTCCCATCATGGCTTATTCTCTGTCTCTCCTCCAATTTGCAAGAAAACTGTGGATGAAGTATGGTCTGAGATCCATAAAGACCAACCACAAAAGAATGAAGCTAATAATAACCTTGGCAGGAATGAGAAACTCAAAAGGCAACAAACACTTGGAGAGATGACTTTGGAGGATTTCCTAATAAAAGCTGGGGTGGTACAAGAATCATCATTATCATTCAAGTCTTCACCTCAACCAATGCCATTTCAGAATCAGATTGGTAATATTGCAATTAATACACCATTGAGTGCATGTTATGAATTGAGGCCTTCAATGGGGACCCAACATAATGTAGTGTCACAGAATAAAAGTTCAGTAAAGGATGCCACTACAAGTTGTGCTGTAGAGAAATGTCAAGAGTCAAGTAGGAGTAGTAATAGAAAGAGGATAATTGATGGTCCTCCTGAAGTGGTAGTGGAGAGAAGGCAACGCAGAATGTTGAAGAATCGAGAATCAGCAGCACGTTCCCGAGCTAGAAGACAGGCATATACGGTAGAGCTAGAAGCAGAGCTGAATCTGCTAAAAGAAGAGAACGACAAACTAAAACAAATTCTGGCTGAAGCTGAGAGCAAGAGAAAACAAGAGCTTTTGCAGAGAAAGCATTCAACAAAGGCTCAAAGGAGGGTAGAAAAATTGAGGTCAATGAAGAGGCCTATAAGCGCAGCCTGGTGA 963 0.406 MALQQSEQDVPMQESESTFSQLSKQNSILSLTLDEFKCKSGKSFGSMNMDEFLSSIWNSDDNQVNPLQAQNETPQSRSVATEPTISHHGLFSVSPPICKKTVDEVWSEIHKDQPQKNEANNNLGRNEKLKRQQTLGEMTLEDFLIKAGVVQESSLSFKSSPQPMPFQNQIGNIAINTPLSACYELRPSMGTQHNVVSQNKSSVKDATTSCAVEKCQESSRSSNRKRIIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENDKLKQILAEAESKRKQELLQRKHSTKAQRRVEKLRSMKRPISAAW 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3605g00045 320 MobiDBLite consensus disorder prediction 1 21 - -
Gabi3605g00045 320 MobiDBLite consensus disorder prediction 288 320 - -
Gabi3605g00045 320 Pfam bZIP transcription factor 238 291 IPR004827 GO:0003700|GO:0006355
Gabi3605g00045 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 236 288 IPR004827 GO:0003700|GO:0006355
Gabi3605g00045 320 Coils Coil 261 295 - -
Gabi3605g00045 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 241 256 IPR004827 GO:0003700|GO:0006355
Gabi3605g00045 320 SUPERFAMILY Leucine zipper domain 238 285 IPR046347 GO:0003700|GO:0006355
Gabi3605g00045 320 MobiDBLite consensus disorder prediction 288 312 - -
Gabi3605g00045 320 SMART brlzneu 234 295 IPR004827 GO:0003700|GO:0006355
Gabi3605g00045 320 Gene3D - 236 292 - -
Gabi3605g00045 320 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 22 295 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3605g00045 Gabi-Chr3605 497301 498685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3605g00045 22 320 bZIP Transcription Factor Family AT3G44460 45.367 3.63e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3605g00045 bZIP_1 2.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3605g00045 K14432 - gmx:100799576 399.053