Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3605g00044 ATGGCGAGTCACAGAATAGGAGAACTTGGTTTGTCTGAGTCAGGGCCTTCAAGTCACCATGTCCCTTATGGTGTGCTTCACGGGATTAATTCTCCTGCATCAAGCTTAATCAATCAAGGATCTGCTTTTGATTTTGGAGAGCTGGAAGAAGCAATTGTTCTGCAAGGAATTAAGAGTAGAAATGATGAAGCCAAAGCATCTTTATTCACAGGCAGACCTGCAGCTACACTGGAAATGTTCCCTTCATGGCCAATGAGATTCCAGCAAACCCCAAGAGGAAGTTCAAAGTCAGGAGGGGAAAGCAATGATTCAGCTCTTTCAAGCAAAACTGAACCACCCTTTGAACCAGAATCTCCGATAAGTAAAAAGGCATCTTCTTCAGATAATCAGGCTTTTGATCAGCAGCATCTTCAGATGGCAAGTGATGCTCCAAGAACAGGTTCTTCACAGAATCAATCAGCAGCCAAATCACCACAGGAAAAGATAAAGGGAATTGGTTCCACATCAGAAAAACCACTTGATGCAAAGACATTGAGACGTTTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGAAAAAAGGCTTATGTGCAGCAGCTAGAGTCAAGTAGATTAAAGCTTACCCAGCTTGAACATGACCTTCAAAGAACACGCTCTCAGGGAATGTTTATGGATTGTGGAGATTAATAACAAATTAACAATGATCTTGTTATAGGAGCTGCAATTTTTGACATGGAATATGCAAGATGGTTAGAAGATGACCACCGGCTCATGGCGGAGCTCAGGAACGGGTTGCATGTGCCCTTATCAGATAGTGATATGAGAGCAATCGTGGATGGATATCTATCCCATTATGATGAAGTTTTCAGGCTCAAGGGTGTGGCTGCTAAATCAGATGTTTTCCACCTCATCAATGGCATATGGACTTCCCAAGCTGAACGCTGCTTCCTCTGGATTGGTGGTTTTAGACCCTCTGAACTCATCATGATGTTGATCCAACAGTTGGAGCCACTAGCGGAGCAACAGATAATGGGCATGTATGGCCTGAGGCATTCCTCACAGCAAGCAGAAGAGGCTCTGTCTCAAGGCCTTGAGCAGCTGCAACAGTCTCTAGTGGACACTATAGCCGGAGGCCCCGTCGTTGACGGTGTTCAACAGATGGTTGTTGCCATGGGCAAGCTTGCCAATCTTGAAGGATTTGTTCGCCAGGCTGATAACTTGAGACAACAGACTCTTCACCAATTATGTCGATTACTGACAGTTCGTCAAGCAGCACGGTGTTTTATTGTGATTGGAGAGTACTATGGTCGTCTTCGAGCCCTTAGTTCTCTTTGGGCATCAAGACCACGAGAGTAA 1362 0.4493 MASHRIGELGLSESGPSSHHVPYGVLHGINSPASSLINQGSAFDFGELEEAIVLQGIKSRNDEAKASLFTGRPAATLEMFPSWPMRFQQTPRGSSKSGGESNDSALSSKTEPPFEPESPISKKASSSDNQAFDQQHLQMASDAPRTGSSQNQSAAKSPQEKIKGIGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEHDLQRTRSQGMFMDCGDXXQINNDLVIGAAIFDMEYARWLEDDHRLMAELRNGLHVPLSDSDMRAIVDGYLSHYDEVFRLKGVAAKSDVFHLINGIWTSQAERCFLWIGGFRPSELIMMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLEQLQQSLVDTIAGGPVVDGVQQMVVAMGKLANLEGFVRQADNLRQQTLHQLCRLLTVRQAARCFIVIGEYYGRLRALSSLWASRPRE 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3605g00044 453 MobiDBLite consensus disorder prediction 80 189 - -
Gabi3605g00044 453 SUPERFAMILY Leucine zipper domain 176 219 IPR046347 GO:0003700|GO:0006355
Gabi3605g00044 453 Pfam bZIP transcription factor 175 218 IPR004827 GO:0003700|GO:0006355
Gabi3605g00044 453 MobiDBLite consensus disorder prediction 87 111 - -
Gabi3605g00044 453 PANTHER TRANSCRIPTION FACTOR TGA9 121 453 - -
Gabi3605g00044 453 SMART brlzneu 172 237 IPR004827 GO:0003700|GO:0006355
Gabi3605g00044 453 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 174 218 IPR004827 GO:0003700|GO:0006355
Gabi3605g00044 453 FunFam BZIP family transcription factor 175 224 - -
Gabi3605g00044 453 Coils Coil 195 222 - -
Gabi3605g00044 453 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 179 194 IPR004827 GO:0003700|GO:0006355
Gabi3605g00044 453 ProSiteProfiles DOG1 domain profile. 242 450 IPR025422 GO:0006351|GO:0043565
Gabi3605g00044 453 MobiDBLite consensus disorder prediction 120 164 - -
Gabi3605g00044 453 Pfam Seed dormancy control 260 333 IPR025422 GO:0006351|GO:0043565
Gabi3605g00044 453 Gene3D - 175 225 - -
Gabi3605g00044 453 MobiDBLite consensus disorder prediction 173 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3605g00044 Gabi-Chr3605 476215 482913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3605g00044 125 453 bZIP Transcription Factor Family AT1G08320 67.169 1.05e-157 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3605g00044 DOG1 6.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3605g00044 K14431 - gmx:100775461 766.148