Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3605g00040 ATGTTCCTTCAAACAGAAAATGGGTCTGGTGATTCTGGACTTGTGCTTTCAACTGATGCAAAGCCTAGATTAAAATGGACAACAGATCTTCATTCCAGGTTTATAGAAGTGGTCAATCAGCTAGGTGGAGCTGACAAGGCAACTCCAAAAACGGTAATGAAACTCATGAGGATTCCAGGGCTTACCTTATATCATCTAAAGAGCCATCTTCAGAAATACAGATTGAGCAAGAATCTGCATGCACAAAGCAACAACATGACACACAAAATCACAACAAATTCAGGTGCAGCATCTGGAGAGAGATTTTTCGAAACCAATGGAACTCACATGAACAAATTAAGCCTTGGACCGCAGGCTAGCAAAGATTTACATATAAGTGAGGCACTGCAAATGCAGATTGAGGTGCAAAGAAGGCTCAATGAACAACTTGAGGTACAGAGACACTTGCAGCTTCTGATAGAGGCTCAAGGAAAATACCTGCAGTCTGTGTTGGAGAAAGCTCAAGAGACCCTTGGAAGACAAAATTTGGGAATGGTAGGACTAGAAGCTGCTAAAGTTCAACTCTCAAAACTTGTGTCCAAAGTATCCTCTCAGTGCCTGAATTCAGCATTTTCAGAACTGAAGGAATTACAAGGATTTTGTCTTCAGCAAACACAAACAAACCAGCCAAATGACTGCTCAGTGGACAGTTGCCTCACATCATGTGACAGATCACAAAAGGAACAAGGGATTCAAAATATGGGCTTAAGACACTTCAATGGAAATGCATTCATGGAACGAAAAGAAGCAACTATAGAAGCTCCCAACCCTCAGAACTTTGAACTCAAATGGTGTGATGAAGTGAAAAAGAACACCTTTCTTACCCCATTAGGCAAGAATGAAGAAAGAAGAAGCTATGCTGTAGAAAACAGTCCCAGCAACTTATCTATGACCATATTGGACTTGAAAGAGAAACAGAAAATGACAGCAACATCATCAAGATTGGACTTAAACACCCATGGAGATAATGAAGCTGCAACAAGTTGTAAACAACTGGACTTGAATAGATTCAGTTGGAACTGA 1062 0.4058 MFLQTENGSGDSGLVLSTDAKPRLKWTTDLHSRFIEVVNQLGGADKATPKTVMKLMRIPGLTLYHLKSHLQKYRLSKNLHAQSNNMTHKITTNSGAASGERFFETNGTHMNKLSLGPQASKDLHISEALQMQIEVQRRLNEQLEVQRHLQLLIEAQGKYLQSVLEKAQETLGRQNLGMVGLEAAKVQLSKLVSKVSSQCLNSAFSELKELQGFCLQQTQTNQPNDCSVDSCLTSCDRSQKEQGIQNMGLRHFNGNAFMERKEATIEAPNPQNFELKWCDEVKKNTFLTPLGKNEERRSYAVENSPSNLSMTILDLKEKQKMTATSSRLDLNTHGDNEAATSCKQLDLNRFSWN 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3605g00040 353 FunFam Myb family transcription factor 20 78 - -
Gabi3605g00040 353 SUPERFAMILY Homeodomain-like 20 76 IPR009057 -
Gabi3605g00040 353 Pfam Myb-like DNA-binding domain 23 74 IPR001005 -
Gabi3605g00040 353 Coils Coil 126 146 - -
Gabi3605g00040 353 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 289 IPR044848 GO:0003700
Gabi3605g00040 353 NCBIfam myb-like DNA-binding domain, SHAQKYF class 21 76 IPR006447 GO:0003677
Gabi3605g00040 353 Pfam MYB-CC type transfactor, LHEQLE motif 124 170 IPR025756 -
Gabi3605g00040 353 Gene3D - 20 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3605g00040 Gabi-Chr3605 443717 445393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3605g00040 53 353 G2-like Transcription Factor Family AT3G04030 52.484 6.30e-99 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi3605g00040 Myb_DNA-binding 8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3605g00040 - - gmx:100810396 529.635