Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3605g00012 ATGTCTTCCAACAAGAGAAGGCTATTGAGAACCCTAGGATGTGGTTGTAGCAAACCAAAGCCCTCTGAGGTATACGAGCCAATCCCAAAACCCAAAATCTCTATTTACAAAAACAAAAACCCTAGCAGCCTCACTCCCTCCACCACTTCCGGCGACCTCTCCGTCGACGATGACGACGACGACGAACACTTCACTTCCACCAGCATCTCCGAAGCCGACACTCATCACGACCATAACAAGAACATCACCACCAACAAGAATCATGGTATACCGAAACCTACGACAAAACTCGTCGACAGCATCGCCGTTGAGAAGGAATCGAAGGATCCATACAACGATTTCCGTTATTCGATGCTGCAAATGATCTTTGAGAGAGAGATCTTCTCAGAAATCGATCTTCAAGAGCTTCTCGAATGCTTTCTTCAACTGAATCCTCAGTGTCACCACCAAGTCATCGTCGAAGCCTTCATCGAAACATGTGAAGAAGCATTCCCTAAGAAGTTTGGTGGCGGTTCTGTTGCTGAACCGTCTCGCAGGAACAACCACATCATTCGAACGAGTCGGTGA 567 0.4727 MSSNKRRLLRTLGCGCSKPKPSEVYEPIPKPKISIYKNKNPSSLTPSTTSGDLSVDDDDDDEHFTSTSISEADTHHDHNKNITTNKNHGIPKPTTKLVDSIAVEKESKDPYNDFRYSMLQMIFEREIFSEIDLQELLECFLQLNPQCHHQVIVEAFIETCEEAFPKKFGGGSVAEPSRRNNHIIRTSR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3605g00012 188 Pfam Transcriptional repressor, ovate 107 162 IPR006458 -
Gabi3605g00012 188 ProSiteProfiles OVATE domain profile. 103 162 IPR006458 -
Gabi3605g00012 188 MobiDBLite consensus disorder prediction 1 93 - -
Gabi3605g00012 188 MobiDBLite consensus disorder prediction 65 83 - -
Gabi3605g00012 188 MobiDBLite consensus disorder prediction 169 188 - -
Gabi3605g00012 188 NCBIfam uncharacterized plant-specific domain TIGR01568 101 160 IPR006458 -
Gabi3605g00012 188 MobiDBLite consensus disorder prediction 36 52 - -
Gabi3605g00012 188 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 56 163 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3605g00012 Gabi-Chr3605 206608 207551 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gabi3605g00012 Ovate 6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3605g00012 - - gmx:102670259 213.386