Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3605g00001 ATGGCTAGGGTTAGTGCTTGTAGTAGCTCTCCTTTGTACTCTTTGCTCTTGATCTCAGCCCTTGTGTTTGCTTCCCATTTTCTTGCATCCGAGGCACAAAAACAGCCCCCAGTAGTGAAGGGATTGTCATTTTCGTTCTTTTCCAAAAATTGTCCTAATCTTGAAACCATTGTGAGAAATCATCTCAAGAAGGTGTTCCAGCAGGACAATGGCCAAGCTCCTGGCTTACTCCGTATCTTCTTCCATGACTGCTTTGTTCAAGGATGCGATGGGTCATTGCTGTTGGATGGAAAACCAGGTGAGAGGGATCAAGTAGCTAATGGAGGCATAAGGACAGAGGCATTGAAGACCATAGATGACCTGCGAGGTCTTGTCCATAACGAGTGTGGAAGGATAGTGTCCTGTGCCGACATCACTGTCTTGGCAGCTCGAGATGCTGTCTTCCTTTCTGGAGGTCCTGATTTTGCAGTGCCCCTAGGAAGAAGGGATGGCCTAACATTCAACAATGATGGAACAAAAAAGCTTCCATCTCCATTTAGCAACACCAGTGAAACCATAAAAAGATTTGCAGAAAAAAACTTTGATGTCACAGATGTGGTAGCCTTCTCAGGTGCACATACCTTTGGCCGTGCACATTGTGGCACATTCTTCAATAGGCTTTCCCCTCTTGATCCCACTATGGACAAAACCTTAGCCAAAAATCTCAAATCCACATGCCCAGATCAAAATTCAGCTAACACAGCAAACTTGGATATTAGGACCCCAACATTGTTTGATAACAAATACTACATTGACCTACAGAGCAAACAGGGTGTGTTCACCTCAGATCAGGACTTGCTCAATGATCAGAGGACAAAAGGGTTGGTAAATTCCTTTGCAATTGATCAGAACCTGTTTTTCCAAAAGTTTGTGAATGCTGTGATAAAGTTGAGCCAATTGGATGTGTTAACTGGGAATCAAGGTGAAATTCGTGCAAAGTGCAATGTGATTAACAAGAAGCAATCTATTTTGACTTCTGTGGTGGAAGAAGTGGTAGAATTGACTATTTAA 1050 0.4314 MARVSACSSSPLYSLLLISALVFASHFLASEAQKQPPVVKGLSFSFFSKNCPNLETIVRNHLKKVFQQDNGQAPGLLRIFFHDCFVQGCDGSLLLDGKPGERDQVANGGIRTEALKTIDDLRGLVHNECGRIVSCADITVLAARDAVFLSGGPDFAVPLGRRDGLTFNNDGTKKLPSPFSNTSETIKRFAEKNFDVTDVVAFSGAHTFGRAHCGTFFNRLSPLDPTMDKTLAKNLKSTCPDQNSANTANLDIRTPTLFDNKYYIDLQSKQGVFTSDQDLLNDQRTKGLVNSFAIDQNLFFQKFVNAVIKLSQLDVLTGNQGEIRAKCNVINKKQSILTSVVEEVVELTI 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3605g00001 349 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Gabi3605g00001 349 CDD secretory_peroxidase 41 330 IPR033905 GO:0004601|GO:0042744
Gabi3605g00001 349 ProSiteProfiles Plant heme peroxidase family profile. 41 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 PRINTS Plant peroxidase signature 197 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 FunFam Peroxidase 45 188 - -
Gabi3605g00001 349 PANTHER - 20 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 Pfam Peroxidase 58 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3605g00001 349 FunFam Peroxidase 176 310 - -
Gabi3605g00001 349 Gene3D Peroxidase, domain 2 177 311 - -
Gabi3605g00001 349 Gene3D - 46 328 - -
Gabi3605g00001 349 SUPERFAMILY Heme-dependent peroxidases 37 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3605g00001 Gabi-Chr3605 19888 22396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3605g00001 6 349 Peroxidase AT1G71695 52.825 7.84e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3605g00001 K00430 - gmx:547550 535.413