Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3595g00040 ATGTTCTCTTCCACATATGACTCTAACCCTTTTCCTAGCTTTCCCTCATCTTCTTACCCTACCCTTCCTTATCTTATTGACCCTGAAAATGGTTTTGCAAGTAACACCCTTCTTGATGAATCACTTGTTCCCTTCATACCCAATACAAATGATGCTCCATTCCCAGATGAAACTCTTGCCAATTTGGCTGTTGCAGACTGCACTGCCATGCTTGAACAGAATGCAAATAATAATGGCTATGGTGTCCACTATGGTAGTATTCCCAATTTTCTCACCCAGAAACCAACCATAGCCAGGAAAGATAGGCACAGTAAGATTCACACATCTCAGGGTTTGAGGGACCGAAGGGTGAGATTGTCTAGCGAAATAGCTCGCAAGTTCTTTGATCTTCAGGACATGCTAGAGTTTGACAAACCTAGTAATACCCTTGAGTGGCTCTTCACAAAATCTGAGAATGCAATCAAAGAACTAGCTCGAAGTAAGCATAGCAGCTGCAGTGGGGGTGACAAGTGCTCCTGTGAACCTGCTGAGCCACACGGTGTGGATTCAAATGACAAATCATTGGTTGGTGTTGATGCTTCAAATAAAGGGAGGAAGTTGAAATGGACACAGAGGGAAGAAGCTTGTGTTCAGACAAAAAAGGAGTCAAGGGAAAGGGCAAGGGCAAGAGCAAGAGAAAGGACTTGTTACAAGATGTGCAACACTGGGAAGGTGCAAGACTTGGACGATAGGTGCCCTGCAACTGCAAATACTCATCAAATACTGCACCAATTGAGGTCATCCATTCAGCCTGAACCTGAGGCTTGTGCAAGATGGCCTCAAATGGTTCAACCTTACCCTTACCTACTTGACAGTGAAGCACCAAGAGATGGCTTTAACGTTATTGAGGAATCTATTATGATAAAAAGAAATATGAAGCCATCTTTGATGTCTTCTCATCATCACCAAAACCTTGTGATCCCTAAGGAAGCAAGTTTTAACAACATTAATGACTACCACTTATTGCCCTATTCGACTTCAAATTGGGATAATAATGTGGCCATTAATGGACGCTCCAACTTTTGTGGAATAGCCACCATGAATCTGTCTACATGTTTCATGAACCAGTGA 1110 0.4279 MFSSTYDSNPFPSFPSSSYPTLPYLIDPENGFASNTLLDESLVPFIPNTNDAPFPDETLANLAVADCTAMLEQNANNNGYGVHYGSIPNFLTQKPTIARKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSENAIKELARSKHSSCSGGDKCSCEPAEPHGVDSNDKSLVGVDASNKGRKLKWTQREEACVQTKKESRERARARARERTCYKMCNTGKVQDLDDRCPATANTHQILHQLRSSIQPEPEACARWPQMVQPYPYLLDSEAPRDGFNVIEESIMIKRNMKPSLMSSHHHQNLVIPKEASFNNINDYHLLPYSTSNWDNNVAINGRSNFCGIATMNLSTCFMNQ 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3595g00040 369 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 94 328 IPR005333 GO:0003700
Gabi3595g00040 369 ProSiteProfiles TCP domain profile. 99 157 IPR017887 -
Gabi3595g00040 369 ProSiteProfiles R domain profile. 214 231 IPR017888 -
Gabi3595g00040 369 Pfam TCP family transcription factor 99 234 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3595g00040 Gabi-Chr3595 358123 359559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3595g00040 97 233 TCP Transcription Factor Family AT1G67260 42.138 8.07e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi3595g00040 TCP 1.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3595g00040 - - aprc:113871835 535.798