Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3595g00035 ATGCATTCGGAAGGTGGGGGTCTTAGGACACCAAAGATGGGATTGGAAGTTGGAGCTTTGAATTCGAAGATGAATGGTGGTGGAAACCTAAGCAGTAAAGATATGATGTTCAGAGCAGATAAAATTGATCTGAAGAGTTTGGATGCCGAGCTAGAAAAGCACTTGAGCAGGGTTTTGTCCAGAAGCATTGAGGCTAAAAGGCCCAAAGAAGAGTGGGAGATTGATTCAGCCAAATTGGATATACGATATGTTGTAGCTAATGGGGCCTATGGTACTGTCTACAGGGGCACTTATGACGGTCAAGATGTTGCAGTGAAAGTGTTGGACTGGGGTGAGGATGGTGTTGCCTCTGCTACTGAAACTGCTGCTTTACGAGCATCATTTCAGCAGGAGGTTACTGTCTGGCGGAATCTTGATCATCCGAATGTCACAAAATTTATTGGAGCTTCAATGGCCACTTCAAATCCTAAGATTCCCTTAAAAGCTGGTCGTCAAGATTCCCTTCCTTCCAAGGCATGTTGTGTTGTTGTTGAGTATGTACCCTGTGGGACACTAAAACAATACTTGTTCAAAAATAGGCGGAAAAAACTTGCATATAAAGTTGTGATTCAGCTGGCGTTGGACCTCTCTAGAGGTCTTAGTTATCTACATTCGAAGAAAATTGTTCATCGTGATGTAAAATCTGAAAATATATTGTTAGATGCCAATCAAAATTTGAAAATTGCTGATTTTGGTGTTGCTCGGGTTGAAGCTATAAATCCAAATGAGATGACGGGTGAAACTGGAACCATTGGATATATGGCACCAGAGGTTCTAGATGGTAAGCCTTACAACAGAAGATGTGATGTATACAGCTTTGGCATTTGCTTGTGGGAAATCTATTGCTGCGATATGCCTTATCCAAATCTAAGCTTTGCTGATGCGTCATATGCGGTTGCTCATCGGAATTTACGACCAAAGATTCCTAAATGTTGTCCAAATGCCTTAGCAAACATAATGCGAAAATGCTGGGATGGGAAACCAGAGAGTCGTCCAGAAATGCATGAGGTGGTGAGAATGTTAGAAGCAATTGATACGAGCAAAGGAGGTGGAATGATACCCGAAGATCAGACTCCATTTTGTTTTTGCTTTGTACCTCTTCGTGGTCCCTAA 1152 0.4219 MHSEGGGLRTPKMGLEVGALNSKMNGGGNLSSKDMMFRADKIDLKSLDAELEKHLSRVLSRSIEAKRPKEEWEIDSAKLDIRYVVANGAYGTVYRGTYDGQDVAVKVLDWGEDGVASATETAALRASFQQEVTVWRNLDHPNVTKFIGASMATSNPKIPLKAGRQDSLPSKACCVVVEYVPCGTLKQYLFKNRRKKLAYKVVIQLALDLSRGLSYLHSKKIVHRDVKSENILLDANQNLKIADFGVARVEAINPNEMTGETGTIGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPNLSFADASYAVAHRNLRPKIPKCCPNALANIMRKCWDGKPESRPEMHEVVRMLEAIDTSKGGGMIPEDQTPFCFCFVPLRGP 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3595g00035 383 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 61 358 - -
Gabi3595g00035 383 FunFam Kinase suppressor of Ras 1 68 162 - -
Gabi3595g00035 383 Gene3D Transferase(Phosphotransferase) domain 1 182 365 - -
Gabi3595g00035 383 Gene3D Phosphorylase Kinase; domain 1 68 160 - -
Gabi3595g00035 383 PRINTS Tyrosine kinase catalytic domain signature 325 347 IPR001245 GO:0004672|GO:0006468
Gabi3595g00035 383 PRINTS Tyrosine kinase catalytic domain signature 215 233 IPR001245 GO:0004672|GO:0006468
Gabi3595g00035 383 PRINTS Tyrosine kinase catalytic domain signature 281 303 IPR001245 GO:0004672|GO:0006468
Gabi3595g00035 383 PRINTS Tyrosine kinase catalytic domain signature 177 190 IPR001245 GO:0004672|GO:0006468
Gabi3595g00035 383 SMART serkin_6 79 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3595g00035 383 Pfam Protein tyrosine and serine/threonine kinase 83 354 IPR001245 GO:0004672|GO:0006468
Gabi3595g00035 383 CDD STKc_MAP3K-like 88 354 - -
Gabi3595g00035 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Gabi3595g00035 383 SUPERFAMILY Protein kinase-like (PK-like) 63 354 IPR011009 -
Gabi3595g00035 383 ProSiteProfiles Protein kinase domain profile. 79 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3595g00035 Gabi-Chr3595 279570 283052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3595g00035 28 383 MAP Kinase Kinase Kinase AT3G22750 76.471 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gabi3595g00035 PK_Tyr_Ser-Thr 1.2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3595g00035 - - gmx:100803917 645.195