Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3595g00032 ATGGACACACCAGAGAAGAACGACATCAACGTCCCTCTTCCCAAATTTGAGATGGAGGATTCACCTGTTTTTAACTATATCAATAGTCTATCTCCTATAAAGCCCGTTTACTCAGTTCGAATTAATCAGACATTCAATTCACTTAGCTTTTCATCCCCTCCATCGGTTTTCACAACACCTCATGACAACTGTCACAAGGAATCCAGATTCCTCCGGAGGCATAACCTTTTGAACACATCAAAGTCTAAGGTTTCATCTGAAGATGTAAATAAAGTTCGTGAAGAGGCTCTTACCGATGCAACTCATGCATGTCATGACTCAAGTGAGCTACAGGAAAATACTGATCCAAGGATTTCCATAGGGGATGCCTCAATAAAGCCATCTGGTGAACATACGAAGTTCTCAATGGAGCTTCAACAATCCTTCAAATATAATTCTGGTAGCCCGGGATATGATCCTCTTTATTGTGGTGATGAGGCTAACTCTATTTTGGAATTGCCTGGTGAACCAGCATCAGATGTTTCCTATGCTCACGAAGGATCTAAAAAAGATTTAGTGGAGGGTGCAATGCATCTTCAGGGTATACGCCATATTGAGACAGAAATTGAAGGCCCATATTGTGAATGGGGTAATTTAATTAGGAATGCCTATGATCTGTCAATGTTTAGTTCCCCAAACGTGACAGAAGCTCTTATGGATCTAATGAATAAACAATTGGATCCTCGGCTTAGCAATTTTGTGTCTCTGTTACCACAATCCACCACTGATAATGGTTCTGAAATGCACAATGTTAATCCAGTTGCTTCTGGTTCAGAACATGAAATCGAAGATCATCCTTCTGAACCAATAGCAACCACAAACTCAGGTCAGACACAGGACAATCTTGCCAATGCAGCTTTGAAGGCTAGCAATCCAAGTTTGAAAACGAATGATGAGCGTGTTTATGTGACACACCATGGTATAAGGAGGCGCTGTCTGGACTTTGGGCTGGCCAGTATGCAAATGAAGAACTCACGTGATAATTCAAACACCAGTTCCGGTACAGAAAATTCTGATGAGAGGAATGTTGGCAATGCAGAGCAACTGCTTCCTACAAAACACAGTGGTGATTCACGGAAATGTGTTTTACCAGGATTTGGTTTGCACTTGAATGCACTTGCAACCTCAAAAGATTACAAAAGCATACAAAATGAAAAGTTGTCTTCTGGAAGACAACCTAATCTTCCTAGCTCCACTTCTTCCTTGCAACTCTCAGCAAGCCAAGTACATCCTCTATCGTTGGTACCTGCATCAGGTGAAAGAGATCTGGAGCCATTAGAGAATGAGGTTCAGCCTGCTAAAGATTGTACCCAGACATCAGTTGATATAGCTGCTGAAGATTTCCATCAAAATACCCCCATAAAGAAAAGGTACATGTTGGAACCAGCTGGGGAAGGGGAGTCTTGCAAGCGGTGTAGGTGTAAGAAATCTAAGTGTTTGAAACTTTATTGTGAGTGCTTTGCTGCTGGAGTCTACTGTATAGAACCTTGCTCATGTCAAGACTGCTTCAACAAACCTATTCATGAAGATACTGTTCTTCAAACTCGCAAGCAGATTATGTCCCGTAACGCACTGGCGTTTGCTCCTAAAGTCATAAGAAGTTCTGATTGTGTACCAGAAATTGGGGATGACCCTAACAAAACGCCAGCTACAGCACGACACAAAAGAGGATGTAATTGCAAGAAATCAAGCTGCGTAAAGAAATATTGTGAATGCTATCAGGGTGGTGTTGGTTGCTCCTTAAGCTGTAGATGTGAAGGGTGCAAGAACTCTTATGGAAGAAAGAATGGTTATGTTCCCACCGGAATAGAAGCTGAGCCGGAAGAAGAAACAGAAGCATGTGAAAAGGGTGTGGTGGAAAAAGCTTCACAGAAAACTGAAATTCAGAATATTGAAGACCATCCTGATCCTGATTGTGCTCTTCTCACAACACCATTACAGCTTTCCAGACCATTGCTTCTGTTACCCTTCTCTGCTTCTGGATTGATTGCCAGCCAAAAGCTTGGGAAATCAAAAGCTAGTAGGTCTCAACTCAAATTTGAAAAGCCTTTTCAAACTGTTCCGGATGAGGATGAACCTCCCATCACTTGCATCAAAGTTTCTTCTCCGAATGGCAAGAGGATCTCCTCTCCTAATTGTGACTTTGGATCATCTCCTACTCGCAGAAGGAAGTTGATATAA 2220 0.4198 MDTPEKNDINVPLPKFEMEDSPVFNYINSLSPIKPVYSVRINQTFNSLSFSSPPSVFTTPHDNCHKESRFLRRHNLLNTSKSKVSSEDVNKVREEALTDATHACHDSSELQENTDPRISIGDASIKPSGEHTKFSMELQQSFKYNSGSPGYDPLYCGDEANSILELPGEPASDVSYAHEGSKKDLVEGAMHLQGIRHIETEIEGPYCEWGNLIRNAYDLSMFSSPNVTEALMDLMNKQLDPRLSNFVSLLPQSTTDNGSEMHNVNPVASGSEHEIEDHPSEPIATTNSGQTQDNLANAALKASNPSLKTNDERVYVTHHGIRRRCLDFGLASMQMKNSRDNSNTSSGTENSDERNVGNAEQLLPTKHSGDSRKCVLPGFGLHLNALATSKDYKSIQNEKLSSGRQPNLPSSTSSLQLSASQVHPLSLVPASGERDLEPLENEVQPAKDCTQTSVDIAAEDFHQNTPIKKRYMLEPAGEGESCKRCRCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLQTRKQIMSRNALAFAPKVIRSSDCVPEIGDDPNKTPATARHKRGCNCKKSSCVKKYCECYQGGVGCSLSCRCEGCKNSYGRKNGYVPTGIEAEPEEETEACEKGVVEKASQKTEIQNIEDHPDPDCALLTTPLQLSRPLLLLPFSASGLIASQKLGKSKASRSQLKFEKPFQTVPDEDEPPITCIKVSSPNGKRISSPNCDFGSSPTRRRKLI 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3595g00032 739 MobiDBLite consensus disorder prediction 334 356 - -
Gabi3595g00032 739 MobiDBLite consensus disorder prediction 251 290 - -
Gabi3595g00032 739 MobiDBLite consensus disorder prediction 397 416 - -
Gabi3595g00032 739 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 737 IPR044522 GO:0003700
Gabi3595g00032 739 SMART CXC_2 566 607 IPR033467 -
Gabi3595g00032 739 SMART CXC_2 480 521 IPR033467 -
Gabi3595g00032 739 MobiDBLite consensus disorder prediction 715 730 - -
Gabi3595g00032 739 MobiDBLite consensus disorder prediction 713 739 - -
Gabi3595g00032 739 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 483 518 IPR005172 -
Gabi3595g00032 739 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 569 604 IPR005172 -
Gabi3595g00032 739 MobiDBLite consensus disorder prediction 251 266 - -
Gabi3595g00032 739 ProSiteProfiles CRC domain profile. 481 606 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3595g00032 Gabi-Chr3595 231871 237171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3595g00032 18 739 CPP Transcription Factor Family AT4G14770 41.438 1.53e-133 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Gabi3595g00032 TCR 9.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3595g00032 - - gmx:100811662 942.569