Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3595g00030 ATGGAGAATCACAACTTCACTTTGAGAATGTTCTGCATTGGATTTACCAAGAGGAGAAGTAACCAGGTGAAGAGTGATGGAAATCGACAATCACACAAAATCAAGCAGATACGTAGGAAGATGCGGGAAATCATGATCAACCATGCAGCATCCTGTGATTTAAAGGAGCTCGTCCGCAAATTCTTTCCTGAGATGATTGGAAAAGAAATAGAGAAAGCTACATCAAGTATCTATCCCCTTCAGAATGTGTTCATTCGAAAAGTCAAGATCCTTAAAGCTCCTAAGTTTGATCTTGGAAAATTGATGGAGGTCCATGGGGACCTCTCCAAAGATGTTGGTACTAAGGTAGACAGACAAGCTGATGAAACAATGGCTGAGGGAACCACCGCTTGA 393 0.4173 MENHNFTLRMFCIGFTKRRSNQVKSDGNRQSHKIKQIRRKMREIMINHAASCDLKELVRKFFPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDLSKDVGTKVDRQADETMAEGTTA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3595g00030 130 PANTHER 40S RIBOSOMAL PROTEIN S3A 4 125 - -
Gabi3595g00030 130 SMART Ribosomal_S3Ae_2 1 94 IPR001593 GO:0003735|GO:0005840|GO:0006412
Gabi3595g00030 130 Pfam Ribosomal S3Ae family 5 94 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3595g00030 Gabi-Chr3595 205603 207500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3595g00030 5 129 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 74.603 2.53e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3595g00030 K02984 - gmx:100805519 208.379