Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3595g00018 ATGAACGGCGGCGGCACCGCCACCTTCCGATCCATCCTCGACAAACCCCTCAACCAGCTCACCGAGGATGACATTTCCCAACTCACCCGCGAAGACTGTCGTAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCCTGGAACAAATCGCAGGCGATCCAGCAGGTCATTTCCCTCAAAGCTCTGCTCGAACCTGCCGACGACGATTCCCCTGCAACCGCCACCGCCACGCACCACCACGACCATGCCTCTCAGGGGAATTTGAATGAAGCTCCGGCGGCGAAAGTCCTGGCTGCTGAAGAGCCCGGTATTCATGTCGCGGAGGAGCTTCAGAAATCTGGGTCGTCTGGGGAAAAACCTACGGAAACGAATGATACCAACGTTGTTAGCCCCAGAGGGTGTGCAACTAGCGGGTCAGGTGGGCAAATGACAATTTTCTACTGTGGTAAGGTGAATGTCTATGACGGAGTCTCACCTGAAAAGGCACGAACAATCATGCAGCTTGCAGCGAGTCCAGTCCAATTTCCTCAGGATGATCCTTTAAGTAAAAATGGAGCTGTTTGGACTTCTTTTTGCCACTTACCAACGGATAATGTCCTCATCCCTAGTGATACAACAATCCTTCAGGTTGCTCAAGCAGATAAGATGGTGGAATATCCTCTGCAGTACAGGGAGAAAGGGAGCAAAGCTCGCGATGCAGATGTAGAGGGTCAGGCAAGCAGAAAAGTGTCATTGCAGCGATATCGTGAAAAGAAAAAAGACAGGGGACGATTGAAGGGCAGGAAATTGACTGGGATAAATTCATCTAACTTAGAGATGTATTTGAATCTTCCAGTGAAGGTCAATGCCTTGAATGGGAATTCAAGCCGTAGTAGCACTAGCTCTCCACCACAGCCTAGACTTCCTCTAGTTTCAAGTGGCTCAGCTGACAACCAGTTAAAAGTTTCCCTTCCCATTGATCTCAATGACAAAGATGTTCAAGAATGCTAA 990 0.4949 MNGGGTATFRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPADDDSPATATATHHHDHASQGNLNEAPAAKVLAAEEPGIHVAEELQKSGSSGEKPTETNDTNVVSPRGCATSGSGGQMTIFYCGKVNVYDGVSPEKARTIMQLAASPVQFPQDDPLSKNGAVWTSFCHLPTDNVLIPSDTTILQVAQADKMVEYPLQYREKGSKARDADVEGQASRKVSLQRYREKKKDRGRLKGRKLTGINSSNLEMYLNLPVKVNALNGNSSRSSTSSPPQPRLPLVSSGSADNQLKVSLPIDLNDKDVQEC 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3595g00018 329 ProSiteProfiles Tify domain profile. 136 171 IPR010399 -
Gabi3595g00018 329 SMART tify_2 136 171 IPR010399 -
Gabi3595g00018 329 MobiDBLite consensus disorder prediction 285 329 - -
Gabi3595g00018 329 MobiDBLite consensus disorder prediction 67 87 - -
Gabi3595g00018 329 MobiDBLite consensus disorder prediction 225 258 - -
Gabi3595g00018 329 MobiDBLite consensus disorder prediction 110 137 - -
Gabi3595g00018 329 MobiDBLite consensus disorder prediction 225 251 - -
Gabi3595g00018 329 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 268 IPR040390 -
Gabi3595g00018 329 Pfam tify domain 140 170 IPR010399 -
Gabi3595g00018 329 MobiDBLite consensus disorder prediction 114 137 - -
Gabi3595g00018 329 MobiDBLite consensus disorder prediction 285 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3595g00018 Gabi-Chr3595 89589 95273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3595g00018 5 283 Tify Gene Family AT4G14720 47.492 2.09e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gabi3595g00018 tify 9.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3595g00018 - - gmx:100813937 477.248