Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3595g00001 ATGGAGGAAAAGAGTGAGTGCTTCGAGTGTCTTCAACTTCGAATCAACTCGGATTTCTCTGATCAATTCGTCTTCAATTATGCCAACTCCACCTCTGCTTTTCCTTTCGGATCGTCAGCTATCGTCCATATTTCTGGTACAGCAGGTGGTGAAACTTCGGATGGTCAATTTATATTGCAGTACATGCCTAGTCATGAGAAGAATTGTTTTACCAATTATGTAAATGAATATATTTTGGATAGCAGTGAAAGCACTAGAAGTAATGATGCTGATATTGGAGGCAGTCAATGTAATAATGTGGTTAATGGTGAAACCAGAAATGCTTCTTGTAATCATTCAGGAAGGTTTTCTTGCTCGAGGACAATCACTTCACTTGCCCCGATTGCTCGTGTGGGAATGTCTTCCTATTCTACATTTCAAGAGGTCGCCACTGATTTCTCGTCTGGATTAATTGAAGATCATGTGTTAGATTCACTCGATCTCTTCATTGAAGGGAAAGCATCTGGAAGGGACAGTATAAATTTCCTTAGTTTACTCGGGTTGCCATCATTTAAGGAAGATACTTTTCCAGGCACTTTGAGGCATCCAAACGTAGCTCCTGTCCTTGCAATTTTTAAAACATCTGATCACATTAACATGGTGCTTCCAAAGACTCCATACAACTTGGAAAGTATTCTTCATTTTAACCCCAATGCCTTAAAGTCTGATTGGAACAGAAGATTTCTTATATATCAGCTACTCTCGGCCTTATTGTACTTACATGGTTTAGGGCTTTCCCACGGTAATATATGCCCATCCAATATCATGGTGACTGACTCGTTATGGTCTTGGCTGAGATTATGGAATGAACCAGCATTGGAATCTAATTTAACTTTGCAAAAGAGTGAAAGCATTAATTCTAAACCTGCAAAAATTGGTTGTTCTAATGGTGGGTGTCGTTCTAATGGCCTTTATGCTGATCTAAAGCTCTCGCCATCAATAGATTGGCATTCTAGCTTCCATCAATGGTGGAGAGGAGAACTAAGTAATTTTGAGTATTTACTCATCTTAAACAGATTAGCTGGAAGAAGGTGGGGGGACCATACATTTCATCCAGTAATGCCTTGGGTAATTAATTTTAGCTCAAAACCTGATGATAACTGTGATGCAGGGTGGCGAGACTTGAGCAAGAGCAAATGGCGCTTGGCTAAAGGTGATGAACAGTTGGATTTCACCTATTCAACATCCGAAATCCCTCATCATGTGTCAGATGAATGTCTGTCTGAATTGGCTGTCTGCAGTTATAAAGCAAGAAGGCTGCCTTTGAGTGTTCTCCGAATGGCTGTTCGTTCAGTGTATGAACCTAATGAATATCCTTCCACAATGCAGAGGCTCTATCAATGGACCCCCGATGAATGCATTCCGGAGTTTTACTGTGATGCCCAAATTTTTAGGTCAATACATGATGGTATGGCTGATTTAGCTGTACCTTCTTGGGCAGAGAGTCCTGAGGATTTCATTAAATTGCATCGCGATGCATTAGAAAGTAATAGGGTGTCATTTCAACTCCATCATTGGATAGACATAACCTTTGGGTACAAAATGTCTGGCCAGGCAGCTATTGCTGCTAAGAATGTTATGCTTCCTCTTTCAGAACCCATGATGCCAAGATCAACTGGACGTCGTCAGCTCTTTACGCGACCACACCCCATTCGGTATGCCACATCTAGAATAACTCGTAATGGTACTAATAAATATACCAAAGTTTGGAGCCAAACAAATGAAATGCAGCGAGAGACATCTCTTCTATCTGAAACTGCTTATCTACAAGAACTAGAACAAGCATCTGCATTTGCTGAACATGCTAGGCATTTGAATGCTTGTTACCATAATCCCTTAAATCAAACAGAGAGGAACATCTCATCGTCGGGAGATCCAACAACAGAGACATTTACTAGAAGTATAAGCAAACTATCTTTGATTGACAGAAATTACCGGGTGCCATATAAAATGAATCTAATTTCTTTTCTTCAACAAATGAAAGAGGAAGATGAAGGGTTCTCAGGATATCCAGACTTGCTACTTTGGAGGCAGAAATTATCTTCTTCAAGACTTGGCTCTGAAGATGTTGCTAAGGACATATTTTCTGTTGGTTGTCTCTTAGCTGAACTTCATCTATGCAGGCCACTCTTTGATTCAATCTCATTGGCAATATACTTGGAGGATGGAACCTTGCCAGGATTTCTGCAGGAACTACCTCCTCATGTTAGATTACTTGTTGAAGCATGCATCCAAAAGGATTGGATGAGGAGGCCATCAGCCAAAATTCTTCTGGAATCACCTTATTTTTCAAAGATAGTCAAGTCCTCCTACTTGTTTCTTGCTCCACTCCAGCTTGTAGCTAAACATGAAACCCGTCTTCGTTATGCTGCAAATCTTGCAAATCAGGGAGCTCTCAGGGAAATGGGCACATTTGCAGCTGAAATATGCGCCACTTATTGCTTACCTCTTGTATTGAATTCTGTTAATGATATTGAAGCTGAATGGGCTTATATACTACTGAAAGAATTCATGAAATGCTTAACAACACAAGCAGTCAAAACATTGATCTTGCCAGCCATACAGAAAATTTTGCAGACCACGGGTTATTTACATTTAAAGGTTTCCCTTTTACAAGATTCATTTGTGCGTGAAATATGGAATCAAGTTGGTAAACAAGCATACCTGGAAACTATTCACCCATTGGTCTTGTCAAACTTGTATATTTCTCCAGATAAAAGTTCAGCTGCCTCTGCTTCGGTGCTTCTAATTGGTTCTAGTGAGGAGATTGGTGTACCTATTACCATCCATCAGACAATTTTGCCTCTTGTTCATTGCTTTGGGAAAGGACTATGTGCTGATGGCATTGATGTGCTGGTCAGAATTGGTGGCATTTTTGGGGAATCTTTTATCGTCAAACAGATGCTACCACTACTGAAAAATGTTTTCCGTTCCTTCATTGATGTATCATGCATGAATAAGCCTGATCCTGTCCAGAGTTGGAGTGCTTTAGCACTTATTGATTGTATGATGACTTTAGATGGTCTTGTAGCGTTCTTGACAGAAGAGGTCATTGTAAAGGAGCTGCTTGAAGACCTTAGTAGTATGCACATTGGGGTTCTTATGCAGAAACAGATGGAAATTGCAGTGCTTCAGGTTGCTGCTACTACTCTCTTTGGAATTTGTCAGCGGATTGGGGCAGATTTGACTGCATTGCATATTCTTCCAAAACTTAAAGAACTATTTGATGAGCTTGCTTTCTCCCAGGAAATTTCTAAAGGTTCGACTACTGTTGGCAGAAACTTGAAGGTTGACAAATTAAGAATTGGTGGGCACTTGCAAATTGAAAGTCGTATGGATCTAGTGCTGGTTCTTTATCCTTCCTTTGCATCTCTGCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTGCTTCTTGAACAATTTCTTCTACGCAATCATAATTGGAAGTGGGAATATGCAGGAGAATCATCAAAAAATGGTTCAGAAAATATTATTGGTAGAAGACCTATGACCCAGGGCTTCACATCAGAATACAATCCAGCAAAGTTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAAGGAAGTAGAAGTGCCAAAAATTTGATCCCTCAGAGACGACCATTTAAAGTTCATCAAAATTCAGTAGTAATGCACGAAGGAAGGTCATACCAAATGAACCATGAACCCTGGTTTTGGTTCCCTAGTCCAGCCACCATCTGGGATGGGCCTGAATTTCTTGGGCGGGTGGGGGTTCAGAAAGACGACCTTCCATGGAAGATAAGAGCTTCTGTTATATACTCTATACGTGCACATCATGGAGCAGTAAGGTCTCTGGCTGTTCATCAAGATGAATGTACTGTTTTCACTGCAGGAATTGGTCAAGGATATAAAGGAACTGTTCAGAAGTGGGAATTGAGCCGAACTAACTGTATGTTCGGCTATTATAGCCATGAGGAGGACCCGGGTACGGGGAAGATGATTGGAGTGGGCCGTGAGTCACGGGGTCTGTTCTACCTTGATGTGCCGAGTCCTTCAGTTGCTTGTTCTCTCACAGAATCTCCTCAGCTCATCCACAGTCGTCTCGGGCATCCTAGTCTTGCGAAATTGCAGAAGATGGTTCCTCTTTTATCCGGTCTTCAAACTTTAGATTGTCAGTCATGTCAGCAAGGAAAGCACATACGCTCCTCCTTTGCTAATCGAGTCAATAAACGAGCTGATGCTCCTTTTTCAATTATTCATTCAGATGTTTGGGGTCCTAGTCGTAGTGTGTCTATTTTAGGTTTTCGGTATTTTGTCACCTTTATTGATGATTTCTCCCGTTGTACTTGGATTTATTTAATGAAAAAC 4404 0.4094 MEEKSECFECLQLRINSDFSDQFVFNYANSTSAFPFGSSAIVHISGTAGGETSDGQFILQYMPSHEKNCFTNYVNEYILDSSESTRSNDADIGGSQCNNVVNGETRNASCNHSGRFSCSRTITSLAPIARVGMSSYSTFQEVATDFSSGLIEDHVLDSLDLFIEGKASGRDSINFLSLLGLPSFKEDTFPGTLRHPNVAPVLAIFKTSDHINMVLPKTPYNLESILHFNPNALKSDWNRRFLIYQLLSALLYLHGLGLSHGNICPSNIMVTDSLWSWLRLWNEPALESNLTLQKSESINSKPAKIGCSNGGCRSNGLYADLKLSPSIDWHSSFHQWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVINFSSKPDDNCDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDAQIFRSIHDGMADLAVPSWAESPEDFIKLHRDALESNRVSFQLHHWIDITFGYKMSGQAAIAAKNVMLPLSEPMMPRSTGRRQLFTRPHPIRYATSRITRNGTNKYTKVWSQTNEMQRETSLLSETAYLQELEQASAFAEHARHLNACYHNPLNQTERNISSSGDPTTETFTRSISKLSLIDRNYRVPYKMNLISFLQQMKEEDEGFSGYPDLLLWRQKLSSSRLGSEDVAKDIFSVGCLLAELHLCRPLFDSISLAIYLEDGTLPGFLQELPPHVRLLVEACIQKDWMRRPSAKILLESPYFSKIVKSSYLFLAPLQLVAKHETRLRYAANLANQGALREMGTFAAEICATYCLPLVLNSVNDIEAEWAYILLKEFMKCLTTQAVKTLILPAIQKILQTTGYLHLKVSLLQDSFVREIWNQVGKQAYLETIHPLVLSNLYISPDKSSAASASVLLIGSSEEIGVPITIHQTILPLVHCFGKGLCADGIDVLVRIGGIFGESFIVKQMLPLLKNVFRSFIDVSCMNKPDPVQSWSALALIDCMMTLDGLVAFLTEEVIVKELLEDLSSMHIGVLMQKQMEIAVLQVAATTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTTVGRNLKVDKLRIGGHLQIESRMDLVLVLYPSFASLLGIEKLRQCCATWLLLEQFLLRNHNWKWEYAGESSKNGSENIIGRRPMTQGFTSEYNPAKLLLNGVGWSIPQSQGSRSAKNLIPQRRPFKVHQNSVVMHEGRSYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDDLPWKIRASVIYSIRAHHGAVRSLAVHQDECTVFTAGIGQGYKGTVQKWELSRTNCMFGYYSHEEDPGTGKMIGVGRESRGLFYLDVPSPSVACSLTESPQLIHSRLGHPSLAKLQKMVPLLSGLQTLDCQSCQQGKHIRSSFANRVNKRADAPFSIIHSDVWGPSRSVSILGFRYFVTFIDDFSRCTWIYLMKN 1468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3595g00001 1468 SUPERFAMILY Protein kinase-like (PK-like) 192 275 IPR011009 -
Gabi3595g00001 1468 Gene3D - 1419 1468 IPR036397 GO:0003676
Gabi3595g00001 1468 Gene3D BEACH domain 326 565 IPR036372 -
Gabi3595g00001 1468 Pfam Beige/BEACH domain 335 545 IPR000409 -
Gabi3595g00001 1468 Gene3D Transferase(Phosphotransferase) domain 1 186 305 - -
Gabi3595g00001 1468 SMART Beach_2 333 565 IPR000409 -
Gabi3595g00001 1468 SUPERFAMILY Protein kinase-like (PK-like) 702 789 IPR011009 -
Gabi3595g00001 1468 CDD Beach 335 565 IPR000409 -
Gabi3595g00001 1468 SUPERFAMILY BEACH domain 325 565 IPR036372 -
Gabi3595g00001 1468 PANTHER GH12955P 3 1338 - -
Gabi3595g00001 1468 Pfam GAG-pre-integrase domain 1354 1411 IPR025724 -
Gabi3595g00001 1468 SUPERFAMILY Ribonuclease H-like 1423 1467 IPR012337 -
Gabi3595g00001 1468 Gene3D Transferase(Phosphotransferase) domain 1 690 784 - -
Gabi3595g00001 1468 ProSiteProfiles BEACH domain profile. 321 591 IPR000409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3595g00001 Gabi-Chr3595 2045 11440 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Gabi3595g00001 Beach 5.3e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3595g00001 K17601 - gmx:100809116 2357.02