Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3593g00007 ATGGGCAGGTATATTATGGATGACCATTCGGACTACAATGACTTAAATGATGAAATTAGGAATGACATGCCTGGTGAATTGGGAGATGACTTATTGAATATGGATGATGATCCAATAGATTACATCAACTTCAGTGATGATGAAATTATAGAAGAGATGCCTACTCATTTAGGAGATGACATATCGAATGATTTAATTGATAACATTCCAAATGTCGTTCCCTTGACACCGACAAAGAATTCTAATATTTTTATTGAGGTTGGAATGGAATTTTCCGAACAAAAGGGTGTAGTGGACTTGTATACAGCATATAGCAAGGTAAAAGGTTTCAGAATTCGAATACGAACAAGGAGGGACAACTTCGTCAAGCTAGTTTGTGCTAGACAGGGTCATCCACCAAAAAAAAATGATAAAGATGTTGCTCAAGTTTGTCAGACCAAATTAAAGAAGACATCATCATTACGAATTGGGTGTGAAGCTAGTGTAAATGCTTATAAGAGTGTAAACACAAAAATGTGGAGAATTACACTATTTGACGACAACCATAATCATGATCTTGTGACTCCAAAGAGTGTTCGTTATCTCAGATCACACAGAAAAATGTCTAATGCTGCAAGATCGTTGATTGAACACTTTAGTGATGCAAGCTTGCCCACAGGAAAAGTGGCTACCATCTTCAAAGGCGATGAGTTATCATTTGATAGTCGAGATTGTTATAACCATCTAAAAAGTGTGAGGAGAAGAATATATAACACAGGAGATGCACAAGCTCTGTTAAACTATTGTGCTAAACAACAATCATTGAATCCAAATTTCTTTTATTCCATTAAATGTGACGATGAAGATCGCATGGAAAGCTTTTTTTGGATTGATGCAAGGTCCAGGAAAGCTTATGAGCTTTTTGGTGATGTCATCACATTTGACACGACATATAGAACTAATAAGTATTCAATGCCATTTGGACCTTTTGTTGGTGTAAATAATCATTTACAGTCAATCTTGTTCGGATGTGCTTTATTGAAAGACGAAACAGAAGATACTTTTATTTGGCTATTTAAGGAATGGCTTCGAGGAATGAATGGGAAACATCCGGGCGCTATAATTACTGATCAGGACATGTCAATTACCAATGCAGTATCCAAAGTTTTCCCAAACAGCAAGCATCGATTTTGTATGTGGCACATCACAAAAAAATTTCCAGAAAAATTGTCTTATGTCTATCAGCAACATGCCACATTTAAGAGCGATTTCAATAACTGTATCCATACAAAAAAGAGCACTCAAGATTTTGAAGACAAATGGCAACGTATTCTTGATAACTATGGTCTTCATGAGAATGAGTGGTTGCAGTCACTTTATTCAATTAAAGCGTCTTGGATACCAATCTTTAACAGATCCATTTTCTTTGCTGGTATGAACACCACTCAGCATAATGAAAGCATCAATTCATTCTTTGATGGTTTTGTTACATCTGGCACAACCTTAAAGGAATTTGTAGAAAAATATAATCAAGCAGTAGATGCTCGTTATGATTCATTCAAAAAACAAGACTTTGAATCTAGGCACAAAGAAAGGCGTTTAACATTGAATATGCCATTGGAAGAACATGCAGCTAAGATTTATACGCGTGCAATTTTCACAAAGTTTAGTGATGTGCTTTCTCATAATTTTCGTCTGTCTAAGGAGAAAATTGGAGATGATGCTGAGTGGGTTACTTATCGAGTTTTTAATAGGAAAGAGAAGGATTATTCTGCAACTGTGAAGATGAAGTTGGAAAATAAAGAAGCAAGATGTTCTTGTCAGTATTTTGAGTTCATGGGAATCCCATGTGAGCATATTATTTCTATTTTTTTGGTTGAAAATGTTGAGCAGATCCCTGAACATATGATTTTGCGACGCTGGAGCAAAGAAAAAAATGATATAATTAGTACAAATAAATACATTTGTAATTTTGATGGAGAGGGACTCCTTCGCGGCTTTGAAATACGCTCTAGAGTTTCAAAACTTATTGAGCTTGCAGATAGGTCCAACGAAGCAGCTAGATTCGCTTGTGATGGTCTTGATTCTCTCACTGAATCTTTAGAAAAATTTCCAAGACCTGATGATAGTATTGGTCTTGAGGATTTTGATTCACATTACTTGAGTTCTCAAGCTGAAGAGTCATCTATGATGAGATTGAATGATCCCAACATTTCACAAACGAAAGGTCGAAAACGGGAGTCACACAATATCTCACAGGGACGTAGAATTCATAGTTGGATTGAAGAAGCATCAAAGAATACTGATATTTGTGGAAATTGCAAGAAACGAGGACATAATAAGCGTACATGTAGAGAGAAAAATTTACATTGA 2352 0.3576 MGRYIMDDHSDYNDLNDEIRNDMPGELGDDLLNMDDDPIDYINFSDDEIIEEMPTHLGDDISNDLIDNIPNVVPLTPTKNSNIFIEVGMEFSEQKGVVDLYTAYSKVKGFRIRIRTRRDNFVKLVCARQGHPPKKNDKDVAQVCQTKLKKTSSLRIGCEASVNAYKSVNTKMWRITLFDDNHNHDLVTPKSVRYLRSHRKMSNAARSLIEHFSDASLPTGKVATIFKGDELSFDSRDCYNHLKSVRRRIYNTGDAQALLNYCAKQQSLNPNFFYSIKCDDEDRMESFFWIDARSRKAYELFGDVITFDTTYRTNKYSMPFGPFVGVNNHLQSILFGCALLKDETEDTFIWLFKEWLRGMNGKHPGAIITDQDMSITNAVSKVFPNSKHRFCMWHITKKFPEKLSYVYQQHATFKSDFNNCIHTKKSTQDFEDKWQRILDNYGLHENEWLQSLYSIKASWIPIFNRSIFFAGMNTTQHNESINSFFDGFVTSGTTLKEFVEKYNQAVDARYDSFKKQDFESRHKERRLTLNMPLEEHAAKIYTRAIFTKFSDVLSHNFRLSKEKIGDDAEWVTYRVFNRKEKDYSATVKMKLENKEARCSCQYFEFMGIPCEHIISIFLVENVEQIPEHMILRRWSKEKNDIISTNKYICNFDGEGLLRGFEIRSRVSKLIELADRSNEAARFACDGLDSLTESLEKFPRPDDSIGLEDFDSHYLSSQAEESSMMRLNDPNISQTKGRKRESHNISQGRRIHSWIEEASKNTDICGNCKKRGHNKRTCREKNLH 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3593g00007 783 ProSiteProfiles Zinc finger SWIM-type profile. 583 621 IPR007527 GO:0008270
Gabi3593g00007 783 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 81 694 IPR031052 GO:0006355
Gabi3593g00007 783 SMART 26again6 596 623 IPR006564 GO:0008270
Gabi3593g00007 783 Pfam MULE transposase domain 304 398 IPR018289 -
Gabi3593g00007 783 Pfam FAR1 DNA-binding domain 100 187 IPR004330 -
Gabi3593g00007 783 Pfam SWIM zinc finger 592 618 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3593g00007 Gabi-Chr3593 26460 30901 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi3593g00007 MULE 1.7e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3593g00007 - - vvo:131633311 671.389