Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3593g00003 ATGAAAGGCATGACAACAACTGAGGAGAAGGATATCTTGAATGGGATCACTGGTTCTGTAAATCCAGGGGAAGTTTTGGCATTGATGGGTCCCTCTGGAAGTGGAAAGACAACTCTTTTAAATCTGCTTGGAGGCAGACTAAGTAGTCAGCACACAATTGGTGGTTCTATCACTTACAATGACCAATCATATTCCAAGTTCCTTAAGAGCAGGATAGGATTCGTGACACAAGATGATGTTCTGTTTCCTCACCTAACTGTGAAAGAAACACTGACATTCGCAGCCAGACTAAGACTGCCAAAGACATGCACGAAGGAGCAAAAGGAAAAAAGAGCTTTAGATGTCATCTATGAGCTTGGCTTGGAGAGGTGCCAAGATACTATGATTGGTGGTTCCTTTGTTCGTGGAATATCTGGTGGAGAGAGGAAGAGAGTTTCTATTGGCAATGAGATCATAATCAACCCTTCTCTTTTGTTTCTTGATGAACCAACTTCTGGTTTGGATTCTACAACAGCCTTAAGGATTGTTCAGATGCTGCAAGACATAGCAGAGGCTGGTAAAACAGTAGTGACAACAATCCACCAACCATCAAGCAGACTCTTTCACAAATTTGACAAGTTGATCCTTCTTGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCACTAGCAATGAGTTACTTCCAATCTATAGGATGTACACCACTTATTTCCATGAACCCAGCAGAGTTTTTGCTAGACCTTGCCAATGGAAACATAAATGATGTTTCCCTACCATCAGAGTTGGAGGACAAAGTGCAAATGGGAAATGCAGAAGCTGAAACACTGAATGGGAAACCATCACCGGCAGTGGTACATGAGTATCTGGTGGAGGCACATGAAACAAGAGTTGCAGAAACAAAGAAAAAAATAATGGTTCCTATCCCCCTTGATGAAGCACTGAAGTCTAAGGTATGTTCTTCTAAAAGACAATGGGGAGCAAGTTGGGAGGAGCAATATTCCATACTTTTTTGGAGAGGAATCAAAGAACGGAGACATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTTTATCCACTGCAATCATCTTAGGATTACTCTGGTGGCAATCAGATGCTAAGAACCCAAAAGATCTCCAAGATCAGGCTGGACTGCTTTTCTTCATTGCTGTTTTCTGGGGATTCTTTCCTGTTTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCCATGCTTACTAAGGAACGAGCAGCAGATATGTACAGACTAAGTGCATACTTCTTGGCTAGAACTACAAGTGACCTTCCACTAGACCTGATATTACCAGTACTTTTTCTTCTTGTGGTTTACTTCATGGCTGGTCTGAGGCTGAGTGCAGGCCCCTTTTTCCTCACCATTCTTACTGTTTTCCTCTGCATTGTGGCTGCTCAGGGACTTGGACTTGCTATTGGTGCTACTCTTATGGACTTGAAAAGAGCTACAACTTTGGCTTCAGTAACTGTGATGACCTTCATGCTGGCTGGAGGATTTTTTGTGCAGAAAGTCCCAGTATTTATTTCATGGATCCGCTACATGTCTTTCAACTACCACACTTACAAACTTTTGCTCAAGGTGCAATACAATCACATCACACCTACCATAAATGGGATTAAAATTGACAATGGTTTAACAGAGGTAGCTGCTCTGATAGTCATGGTTTTTGGTTACCGTTTCTTGGCTTATCTTTCTTTGAGGAGAATGAAACTTCAATCTGGAGCTTAA 1761 0.4179 MKGMTTTEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLSSQHTIGGSITYNDQSYSKFLKSRIGFVTQDDVLFPHLTVKETLTFAARLRLPKTCTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGISGGERKRVSIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASLAMSYFQSIGCTPLISMNPAEFLLDLANGNINDVSLPSELEDKVQMGNAEAETLNGKPSPAVVHEYLVEAHETRVAETKKKIMVPIPLDEALKSKVCSSKRQWGASWEEQYSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDAKNPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLTKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSAGPFFLTILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPVFISWIRYMSFNYHTYKLLLKVQYNHITPTINGIKIDNGLTEVAALIVMVFGYRFLAYLSLRRMKLQSGA 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3593g00003 586 ProSitePatterns ABC transporters family signature. 137 151 IPR017871 GO:0005524|GO:0016887
Gabi3593g00003 586 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 237 IPR003439 GO:0005524
Gabi3593g00003 586 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 8 574 - -
Gabi3593g00003 586 Pfam ABC-2 type transporter 331 540 IPR013525 GO:0016020|GO:0140359
Gabi3593g00003 586 Pfam ABC transporter 13 165 IPR003439 GO:0005524
Gabi3593g00003 586 Gene3D - 4 231 IPR027417 -
Gabi3593g00003 586 FunFam ABC transporter G family member 22 1 231 - -
Gabi3593g00003 586 SMART AAA_5 22 214 IPR003593 GO:0016887
Gabi3593g00003 586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 228 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3593g00003 Gabi-Chr3593 11462 17137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3593g00003 12 266 Calmodulin-binding Proteins AT2G36910 28.352 6.39e-15 76.6