Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3592g00038 ATGTCAAGTTTTCACGTTGGTGGGAAGGTGGTGGACAGAGTTGATTTGCTGAGGAAGAAGCAATTGCCGTGGCGCGTGGACGTTTGGCCTTTCGCTATTATATACGGCGCGTGGGTATCGGTGATTCTTCCCAGCTTGGACTTCGTTGATGCTGCAATTGTTTTGGGTGCGCTCGTTGCTCTTCACATCCTCGTTTGGCTCTTCACGGGTTGGTCCATTGATTTCAAGTGTTTTGCACATTATAGCAAGGCTAAGAATATTCAGCAAGCCGATTCTTGCAAGATAACTCCGGCTAAGTTTTCAGGTTCTAAAGAAGTCGTGCCGCTTCGTTTTCGGAAAATATCTGCAAGTTCTTCATCAGCGGCGGATTTGGAAGAGATTTACTTTGATTTTAGAAAACAATGTTTTGTCTATTCAAAGGAGAAGGGGACTTTTTGCAAACTTTCATACCCTACAAAGGAAACATTTGGATATTATCTCAAGAGTAGTGGACATGGCTCTGAAGCCAAAGTTTTTGCTGCTACTGAGAAATGGGGGCGGAATGTATTTGATTATCCTCAGCCAACATTTCAGAAATTGATGAAAGAGCACTGTATGGAGCCATTTTTTGTATTTCAGGTTTTCTGTGTGGGTCTCTGGTGTTTGGATGAATACTGGTATTATAGCTTGTTCACTCTATTTATGCTGTTCATGTTTGAGTCAACCATGGCAAAAAGTCGGTTGAAGACTCTAACTGAGTTAAGACGTGTTAGAGTGGATAGCCAGATCCTAATGGTACATCGCTGTGGCAAGTGGGTAAAACTCTCTGGTACAGACCTTTTGCCTGGGGATGTTGTCTCTATTGGTCGCTCTTCTGGTCAGAATGGAGAGGAGAAGTCTGTACCTGCAGACATGCTTATATTGGCTGGAAGTGTGATTGTGAATGAAGCTATTCTCACAGGCGAGTCTACTCCTCAATGGAAGGTTTCAATTGCGGGTAGGGGGGTTGAGGAGAAGTTGTCTGCCAGGCGAGACAAAAGCCATGTTTTATTTGGTGGAACTAAAATATTGCAGCACACTCCAGACAAGACCTTTCCTCTGAAAACACCTGATGGTGGCTGCTTGGCTGTTGTCCTGAGAACGGGGTTTGAGACAAGTCAAGGGAAGTTGATGCGGACAATCTTATTCTCTACAGAAAGGGTGACTGCTAATAGCTGGGAAAGTGGATTGTTCATTTTATTCTTGGTTGTATTTGCTCTGATTGCTGCTGGTTATGTGCTCATTAAGGGGCTAGAAGATCCCTTGAGGAGCAAGTATAAACTTATACTAAGTTGTTCACTTATTGTTACCTCTGTGATACCTCCCGAGTTACCAATGGAATTATCGATAGCTGTTAATACTTCTCTGATTGCACTGGCACGACGTGGAATTTTTTGCACAGAACCTTTTCGAATACCATTTGCTGGGAAGGTTGATATATGTTGTTTTGACAAGACTGGGACACTTACATCTGATGACATGGAGTTTTCTGGAGTTGTTGGGTTGACAGGAACTACAGATTTAGAATCTGATATGAGCAAAGTGCCTGTGCGAACAGTAGAAATCCTGGCTTCTTGCCATGCATTGGTATTTGTTGAGAATAAGCTGGTTGGTGATCCTCTTGAGAAGGCTGCACTTAAGGGAATAGATTGGAGTTATAAATCTGATGAGAAGGCTGTTCCAAAAAAGGGAAATGGCAATCCCGTCCAAATTGTTCAGCGGTACCATTTTGCATCTCACTTAAAACGAATGGCAGTTGTTGTGCGCATTCAGGAGGAATTTTTTGCCTTTGTGAAGGGTGCCCCAGAAATTATTCAAGAGAGGCTCATTGATATACCCCCATCATATGTTGAAAACTACAAAAAATATACACGTCAGGGGTCTCGTGTTCTTGCTCTGGCTTACAAGTCTCTTTCTGACATGACAGTCAGTGAAGCTAGAAGCTTGGATAGGGATATGGTGGAGAATGGGCTTACTTTTGCTGGTTTTGTGGTATTTAATTGTCCCATAAGAACAGATTCAGCCACTGTCTTATCTGAATTGAAAGGATCTTCACATGACTTGGTGATGATTACTGGTGACCAAGCTTTGACAGCTTGTCATGTTGCTAGCCAAGTTCATATTATATCAAAACCTGCATTAATCCTTGGCCCAGCAAGTAACGGTGAAGGATATAATTGGATGTCCCCTGATGAGACTGAAAATATTCGCTACAGTGATAAAGAGGTTGAATCTTTATCAGAGACTCATGATCTTTGTGTTGGAGGTGATTGCATTGAGATGTTGCAACAGACATCAGCTCATCTTCTGGTCATTCCTCGTGTGAAGGTTTTTGCTCGAGTTGCCCCTGAGCAAAAAGAATTTATCATGACCACTTTCAAAACAGTGGGACGGTTGACTTTGATGTGTGGGGATGGAACCAATGATGTTGGAGCTTTGAAGCAGGCCCATGTAGGAGTTGCTCTTCTTAATGCATTGCCTCCAACTCAAAGTGGAAACTCCTCTTCAGATTCGCCTGGGGAAGGTTCAAAATCTGTCAAGCCAAAGAAATCTAAGCCTGCCCTGGAAGCATCTGGAAAGACTGTTAGCCCAATTGGAGAAGGCTCTTCAAAAGCGAAAGTTGCTTCAAAATCAGATTCCACCAGCCACTCACCTGCTAACCGTCATCAGGCAGCTGTCGATATGCAACGACAGAAGCTTAAGAAGATGATGGATGAGCTTAATGAGGAAGGAGATGGCCGTGCACCCGTTGTCAAGCTTGGTGATGCCTCAATGGCATCCCCATTCACTGCAAAGCATGCGTCTGTTGCTCCCACCACTGACATAATTCGTCAAGGCCGGAGTACCCTAGTGACAACCCTCCAGATGTTTAAAATTCTGGGCCTCAACTGCCTTGCTACTGCATATGTGTTGAGTGTTATGTATCTGGATGGTGTCAAGCTAGGTGATGTACAAGCCACAATAAGTGGTGTCTTCACTGCTGCATTTTTCCTCTTTATCTCACATGCACGCCCTCTTCCCGGTCTTTCATCTGAACGTCCCCACCCCAACATCTTCTGTGCTTACGTCTTCCTTTCCCTCTTGGGACAATTTTCTGTTCACCTGTTTTTTCTGATTTCATCTGTGAGAGAAGCTGAGAAATACATGCCAGATGAATGCATTGAACCAGATGCAGATTTTCATCCCAACCTGGTGAATACTGTTTCCTACATGGTGAGCATGATGCTTCAGGTGGCCACATTCGCCGTGAACTATATGGGCCATCCCTTCAACCAGAGTATTCCTGAAAACAAGCCATTCCTGTACGCTCTTGTTGCTGCTGTTGGTTTCTTTACTGTGATTACATCTGATCTCTTCAGGGGCTTAAATGATTGGTTGAAGTTGGTGCCACTGCCAACGGGATTAAGGGATAAATTATTGATTTGGGCATTTCTGATGTTTTTGGTATGCTATTCATGGGAGAGACTATTGAGGTGGGCCTTCCCGGGCAAGATCCCAGCTTGGAAGAAGCGACAACGGCATGCTGTATCTAACTTAGAAAAGAAGAAACAGGTCTAA 3576 0.4385 MSSFHVGGKVVDRVDLLRKKQLPWRVDVWPFAIIYGAWVSVILPSLDFVDAAIVLGALVALHILVWLFTGWSIDFKCFAHYSKAKNIQQADSCKITPAKFSGSKEVVPLRFRKISASSSSAADLEEIYFDFRKQCFVYSKEKGTFCKLSYPTKETFGYYLKSSGHGSEAKVFAATEKWGRNVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVRVDSQILMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQNGEEKSVPADMLILAGSVIVNEAILTGESTPQWKVSIAGRGVEEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLIKGLEDPLRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLTGTTDLESDMSKVPVRTVEILASCHALVFVENKLVGDPLEKAALKGIDWSYKSDEKAVPKKGNGNPVQIVQRYHFASHLKRMAVVVRIQEEFFAFVKGAPEIIQERLIDIPPSYVENYKKYTRQGSRVLALAYKSLSDMTVSEARSLDRDMVENGLTFAGFVVFNCPIRTDSATVLSELKGSSHDLVMITGDQALTACHVASQVHIISKPALILGPASNGEGYNWMSPDETENIRYSDKEVESLSETHDLCVGGDCIEMLQQTSAHLLVIPRVKVFARVAPEQKEFIMTTFKTVGRLTLMCGDGTNDVGALKQAHVGVALLNALPPTQSGNSSSDSPGEGSKSVKPKKSKPALEASGKTVSPIGEGSSKAKVASKSDSTSHSPANRHQAAVDMQRQKLKKMMDELNEEGDGRAPVVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPGLSSERPHPNIFCAYVFLSLLGQFSVHLFFLISSVREAEKYMPDECIEPDADFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSIPENKPFLYALVAAVGFFTVITSDLFRGLNDWLKLVPLPTGLRDKLLIWAFLMFLVCYSWERLLRWAFPGKIPAWKKRQRHAVSNLEKKKQV 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3592g00038 1191 Coils Coil 892 916 - -
Gabi3592g00038 1191 Gene3D - 483 668 IPR023299 GO:0000166
Gabi3592g00038 1191 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166
Gabi3592g00038 1191 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Gabi3592g00038 1191 Gene3D - 669 843 IPR023214 -
Gabi3592g00038 1191 SFLD p-type atpase 469 954 IPR044492 -
Gabi3592g00038 1191 MobiDBLite consensus disorder prediction 833 903 - -
Gabi3592g00038 1191 SUPERFAMILY Calcium ATPase, transduction domain A 255 387 IPR008250 -
Gabi3592g00038 1191 FunFam Cation-transporting ATPase 484 668 - -
Gabi3592g00038 1191 NCBIfam HAD-IC family P-type ATPase 403 509 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi3592g00038 1191 MobiDBLite consensus disorder prediction 833 848 - -
Gabi3592g00038 1191 Pfam haloacid dehalogenase-like hydrolase 485 713 - -
Gabi3592g00038 1191 MobiDBLite consensus disorder prediction 879 897 - -
Gabi3592g00038 1191 SUPERFAMILY HAD-like 483 834 IPR036412 -
Gabi3592g00038 1191 Gene3D - 226 388 - -
Gabi3592g00038 1191 PANTHER CATION-TRANSPORTING ATPASE-RELATED 12 1167 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Gabi3592g00038 1191 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1168 IPR023298 -
Gabi3592g00038 1191 FunFam Cation-transporting ATPase 226 388 - -
Gabi3592g00038 1191 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Gabi3592g00038 1191 FunFam Cation-transporting ATPase 669 844 - -
Gabi3592g00038 1191 Pfam E1-E2 ATPase 258 468 - -
Gabi3592g00038 1191 NCBIfam P-type ATPase of unknown pump specificity (type V) 44 1148 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Gabi3592g00038 1191 CDD P-type_ATPase_cation 173 1106 IPR047820 -
Gabi3592g00038 1191 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Gabi3592g00038 1191 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Gabi3592g00038 1191 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Gabi3592g00038 1191 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Gabi3592g00038 1191 SFLD C1.7: P-type atpase like 469 954 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3592g00038 1 1191 Primary Pumps ATPases AT5G23630 78.057 0.0 1925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3592g00038 K14950 - gmx:100789385 2164.81